Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61694781-61867843

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcyox1l 18 61696837 to 61707635 10798 - protein coding gene prenylcysteine oxidase 1 like
Tssr153602 18 61697093 to 61697097 4 - TSS region transcription start site region 153602
Cpgi10115 18 61697253 to 61698031 778 CpG island CpG island 10115
Cpgi10116 18 61702218 to 61702431 213 CpG island CpG island 10116
Cpgi10117 18 61707025 to 61707995 970 CpG island CpG island 10117
Tssr153603 18 61707583 to 61707658 75 - TSS region transcription start site region 153603
Grpel2 18 61712440 to 61726331 13891 - protein coding gene GrpE-like 2, mitochondrial
Gm17883 18 61713695 to 61714683 988 + pseudogene predicted gene, 17883
Tssr153604 18 61719318 to 61719332 14 - TSS region transcription start site region 153604
Tssr153605 18 61719347 to 61719360 13 - TSS region transcription start site region 153605
Tssr153606 18 61719795 to 61719833 38 - TSS region transcription start site region 153606
Tssr153607 18 61725425 to 61725468 43 - TSS region transcription start site region 153607
Tssr151481 18 61725720 to 61725734 14 + TSS region transcription start site region 151481
Cpgi10118 18 61725949 to 61726870 921 CpG island CpG island 10118
Tssr153608 18 61726302 to 61726336 34 - TSS region transcription start site region 153608
Tssr153609 18 61726347 to 61726358 11 - TSS region transcription start site region 153609
1500015A07Rik 18 61726390 to 61728254 1864 + antisense lncRNA gene RIKEN cDNA 1500015A07 gene
Tssr151482 18 61726393 to 61726451 58 + TSS region transcription start site region 151482
Afap1l1 18 61730262 to 61786662 56400 - protein coding gene actin filament associated protein 1-like 1
Tssr153610 18 61735671 to 61735682 11 - TSS region transcription start site region 153610
Tssr153611 18 61737340 to 61737376 36 - TSS region transcription start site region 153611
Cpgi10119 18 61737376 to 61737589 213 CpG island CpG island 10119
Cpgi10120 18 61751520 to 61751740 220 CpG island CpG island 10120
Tssr153612 18 61754923 to 61754929 6 - TSS region transcription start site region 153612
Gm41748 18 61779781 to 61782843 3062 + lncRNA gene predicted gene, 41748
Cpgi10121 18 61786201 to 61787010 809 CpG island CpG island 10121
Tssr153613 18 61786636 to 61786691 55 - TSS region transcription start site region 153613
Gm35919 18 61794853 to 61799862 5009 - pseudogene predicted gene, 35919
Ablim3 18 61799395 to 61911852 112457 - protein coding gene actin binding LIM protein family, member 3
Cpgi10122 18 61799603 to 61800008 405 CpG island CpG island 10122
Tssr153614 18 61826997 to 61827037 40 - TSS region transcription start site region 153614
Tssr5348 18 61827051 to 61827056 5 - TSS region transcription start site region 5348