Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61661837-61742635

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Carmn 18 61649625 to 61665537 15912 - lincRNA gene cardiac mesoderm enhancer-associated non-coding RNA
Tssr153599 18 61665401 to 61665416 15 - TSS region transcription start site region 153599
Tssr153600 18 61665484 to 61665502 18 - TSS region transcription start site region 153600
Tssr153601 18 61665525 to 61665532 7 - TSS region transcription start site region 153601
Tssr151480 18 61687911 to 61687922 11 + TSS region transcription start site region 151480
Il17b 18 61687935 to 61692537 4602 + protein coding gene interleukin 17B
Gm38165 18 61691037 to 61692246 1209 - antisense lncRNA gene predicted gene, 38165
Cpgi10114 18 61692073 to 61692623 550 CpG island CpG island 10114
Pcyox1l 18 61696837 to 61707635 10798 - protein coding gene prenylcysteine oxidase 1 like
Tssr153602 18 61697093 to 61697097 4 - TSS region transcription start site region 153602
Cpgi10115 18 61697253 to 61698031 778 CpG island CpG island 10115
Cpgi10116 18 61702218 to 61702431 213 CpG island CpG island 10116
Cpgi10117 18 61707025 to 61707995 970 CpG island CpG island 10117
Tssr153603 18 61707583 to 61707658 75 - TSS region transcription start site region 153603
Grpel2 18 61712440 to 61726331 13891 - protein coding gene GrpE-like 2, mitochondrial
Gm17883 18 61713695 to 61714683 988 + pseudogene predicted gene, 17883
Tssr153604 18 61719318 to 61719332 14 - TSS region transcription start site region 153604
Tssr153605 18 61719347 to 61719360 13 - TSS region transcription start site region 153605
Tssr153606 18 61719795 to 61719833 38 - TSS region transcription start site region 153606
Tssr153607 18 61725425 to 61725468 43 - TSS region transcription start site region 153607
Tssr151481 18 61725720 to 61725734 14 + TSS region transcription start site region 151481
Cpgi10118 18 61725949 to 61726870 921 CpG island CpG island 10118
Tssr153608 18 61726302 to 61726336 34 - TSS region transcription start site region 153608
Tssr153609 18 61726347 to 61726358 11 - TSS region transcription start site region 153609
1500015A07Rik 18 61726390 to 61728254 1864 + antisense lncRNA gene RIKEN cDNA 1500015A07 gene
Tssr151482 18 61726393 to 61726451 58 + TSS region transcription start site region 151482
Afap1l1 18 61730262 to 61786662 56400 - protein coding gene actin filament associated protein 1-like 1
Tssr153610 18 61735671 to 61735682 11 - TSS region transcription start site region 153610
Tssr153611 18 61737340 to 61737376 36 - TSS region transcription start site region 153611
Cpgi10119 18 61737376 to 61737589 213 CpG island CpG island 10119