Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61559060-61689094

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Csnk1a1 18 61555274 to 61590061 34787 + protein coding gene casein kinase 1, alpha 1
Tssr151470 18 61566140 to 61566146 6 + TSS region transcription start site region 151470
Tssr151471 18 61568344 to 61568361 17 + TSS region transcription start site region 151471
Tssr153575 18 61575479 to 61575488 9 - TSS region transcription start site region 153575
Tssr151472 18 61576174 to 61576179 5 + TSS region transcription start site region 151472
Tssr151473 18 61587474 to 61587495 21 + TSS region transcription start site region 151473
Tssr151474 18 61587569 to 61587620 51 + TSS region transcription start site region 151474
Tssr151475 18 61589215 to 61589228 13 + TSS region transcription start site region 151475
C630007K24Rik 18 61591370 to 61593059 1689 unclassified gene RIKEN cDNA C630007K24 gene
Gm41747 18 61619900 to 61621042 1142 + lncRNA gene predicted gene, 41747
Tssr153576 18 61624060 to 61624094 34 - TSS region transcription start site region 153576
Tssr153577 18 61626434 to 61626445 11 - TSS region transcription start site region 153577
Gm35607 18 61628032 to 61642168 14136 - lncRNA gene predicted gene, 35607
Tssr153578 18 61628154 to 61628190 36 - TSS region transcription start site region 153578
Tssr151476 18 61628347 to 61628367 20 + TSS region transcription start site region 151476
Tssr153579 18 61632515 to 61632540 25 - TSS region transcription start site region 153579
Tssr153580 18 61632681 to 61632691 10 - TSS region transcription start site region 153580
Tssr151477 18 61632710 to 61632725 15 + TSS region transcription start site region 151477
Tssr151478 18 61632940 to 61632982 42 + TSS region transcription start site region 151478
Tssr153581 18 61635389 to 61635396 7 - TSS region transcription start site region 153581
Tssr151479 18 61639603 to 61639632 29 + TSS region transcription start site region 151479
Bvht 18 61639653 to 61647485 7832 + lincRNA gene braveheart long non-coding RNA
Tssr153582 18 61639874 to 61639885 11 - TSS region transcription start site region 153582
Tssr153583 18 61646316 to 61646321 5 - TSS region transcription start site region 153583
Tssr153584 18 61646667 to 61646673 6 - TSS region transcription start site region 153584
Cpgi10112 18 61647744 to 61648014 270 CpG island CpG island 10112
Tssr153585 18 61647824 to 61647828 4 - TSS region transcription start site region 153585
Mirc32 18 61647825 to 61649258 1433 complex/cluster/region microRNA cluster 32, including Mir143 and Mir145a
Mir145a 18 61647825 to 61647894 69 - miRNA gene microRNA 145a
Cpgi10113 18 61649120 to 61649331 211 CpG island CpG island 10113
Mir143 18 61649196 to 61649258 62 - miRNA gene microRNA 143
Carmn 18 61649625 to 61665537 15912 - lincRNA gene cardiac mesoderm enhancer-associated non-coding RNA
Tssr153586 18 61652357 to 61652373 16 - TSS region transcription start site region 153586
Tssr153587 18 61652386 to 61652397 11 - TSS region transcription start site region 153587
Tssr153588 18 61652419 to 61652440 21 - TSS region transcription start site region 153588
Tssr153589 18 61652449 to 61652464 15 - TSS region transcription start site region 153589
Tssr153590 18 61657881 to 61657927 46 - TSS region transcription start site region 153590
Tssr153591 18 61657956 to 61657972 16 - TSS region transcription start site region 153591
Tssr153592 18 61657977 to 61658007 30 - TSS region transcription start site region 153592
Tssr153593 18 61658014 to 61658029 15 - TSS region transcription start site region 153593
Tssr153594 18 61658048 to 61658135 87 - TSS region transcription start site region 153594
Tssr153595 18 61658140 to 61658156 16 - TSS region transcription start site region 153595
Tssr153596 18 61658169 to 61658184 15 - TSS region transcription start site region 153596
Tssr153597 18 61658266 to 61658280 14 - TSS region transcription start site region 153597
Tssr153598 18 61658312 to 61658333 21 - TSS region transcription start site region 153598
Tssr153599 18 61665401 to 61665416 15 - TSS region transcription start site region 153599
Tssr153600 18 61665484 to 61665502 18 - TSS region transcription start site region 153600
Tssr153601 18 61665525 to 61665532 7 - TSS region transcription start site region 153601
Tssr151480 18 61687911 to 61687922 11 + TSS region transcription start site region 151480
Il17b 18 61687935 to 61692537 4602 + protein coding gene interleukin 17B