Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61399572-61569575

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppargc1b 18 61298136 to 61400431 102295 - protein coding gene peroxisome proliferative activated receptor, gamma, coactivator 1 beta
Cpgi10108 18 61398327 to 61400923 2596 CpG island CpG island 10108
Tssr153564 18 61400363 to 61400449 86 - TSS region transcription start site region 153564
Tssr153565 18 61400463 to 61400470 7 - TSS region transcription start site region 153565
Gm8755 18 61433497 to 61434201 704 - pseudogene predicted gene 8755
Tssr151464 18 61448250 to 61448261 11 + TSS region transcription start site region 151464
Gm25834 18 61467053 to 61467153 100 - snRNA gene predicted gene, 25834
Lncbate10 18 61470225 to 61484607 14382 - lncRNA gene brown adipose tissue enriched long noncoding RNA 10
Tssr153566 18 61484572 to 61484575 3 - TSS region transcription start site region 153566
Tssr153567 18 61484600 to 61484613 13 - TSS region transcription start site region 153567
Tssr153568 18 61484754 to 61484779 25 - TSS region transcription start site region 153568
Gm46637 18 61484766 to 61490132 5366 + protein coding gene predicted gene, 46637
Tssr153569 18 61484810 to 61484829 19 - TSS region transcription start site region 153569
Arhgef37 18 61493794 to 61536536 42742 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 37
Cpgi10109 18 61505420 to 61505725 305 CpG island CpG island 10109
Tssr153570 18 61531995 to 61531996 1 - TSS region transcription start site region 153570
Cpgi10110 18 61536266 to 61536807 541 CpG island CpG island 10110
Tssr153571 18 61536522 to 61536558 36 - TSS region transcription start site region 153571
Tssr153572 18 61536570 to 61536583 13 - TSS region transcription start site region 153572
Tssr153573 18 61536786 to 61536805 19 - TSS region transcription start site region 153573
Tssr5347 18 61553582 to 61553585 3 + TSS region transcription start site region 5347
Cpgi10111 18 61554886 to 61556036 1150 CpG island CpG island 10111
Tssr153574 18 61555035 to 61555083 48 - TSS region transcription start site region 153574
Tssr151465 18 61555225 to 61555239 14 + TSS region transcription start site region 151465
Tssr151466 18 61555258 to 61555290 32 + TSS region transcription start site region 151466
Csnk1a1 18 61555274 to 61590061 34787 + protein coding gene casein kinase 1, alpha 1
Tssr151467 18 61555308 to 61555345 37 + TSS region transcription start site region 151467
Tssr151468 18 61555706 to 61555751 45 + TSS region transcription start site region 151468
Tssr151469 18 61555933 to 61556000 67 + TSS region transcription start site region 151469
Tssr151470 18 61566140 to 61566146 6 + TSS region transcription start site region 151470
Tssr151471 18 61568344 to 61568361 17 + TSS region transcription start site region 151471