Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61114342-61334357

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W3q15 18 5041119 to 61139571 56098452 QTL weight 3 weeks QTL 15
Csf1r 18 61105572 to 61132149 26577 + protein coding gene colony stimulating factor 1 receptor
Tssr151431 18 61114787 to 61114874 87 + TSS region transcription start site region 151431
Tssr151432 18 61117060 to 61117111 51 + TSS region transcription start site region 151432
Tssr151433 18 61117283 to 61117292 9 + TSS region transcription start site region 151433
Mir6983 18 61117468 to 61117531 63 + miRNA gene microRNA 6983
Tssr151434 18 61117543 to 61117571 28 + TSS region transcription start site region 151434
Tssr151435 18 61117629 to 61117646 17 + TSS region transcription start site region 151435
Tssr151436 18 61117661 to 61117672 11 + TSS region transcription start site region 151436
Tssr151437 18 61118945 to 61119014 69 + TSS region transcription start site region 151437
Tssr151438 18 61121969 to 61121979 10 + TSS region transcription start site region 151438
Tssr151439 18 61122018 to 61122026 8 + TSS region transcription start site region 151439
Tssr151440 18 61124216 to 61124281 65 + TSS region transcription start site region 151440
Tssr151441 18 61127751 to 61127817 66 + TSS region transcription start site region 151441
Tssr151442 18 61127836 to 61127925 89 + TSS region transcription start site region 151442
Tssr151443 18 61128994 to 61129007 13 + TSS region transcription start site region 151443
Tssr151444 18 61129048 to 61129077 29 + TSS region transcription start site region 151444
Tssr151445 18 61129259 to 61129272 13 + TSS region transcription start site region 151445
Tssr151446 18 61129273 to 61129296 23 + TSS region transcription start site region 151446
Tssr151447 18 61129328 to 61129353 25 + TSS region transcription start site region 151447
Tssr151448 18 61129699 to 61129718 19 + TSS region transcription start site region 151448
Tssr151449 18 61130429 to 61130440 11 + TSS region transcription start site region 151449
Tssr151450 18 61130550 to 61130577 27 + TSS region transcription start site region 151450
Tssr151451 18 61130609 to 61130640 31 + TSS region transcription start site region 151451
Tssr151452 18 61130644 to 61130697 53 + TSS region transcription start site region 151452
Tssr151453 18 61130710 to 61130724 14 + TSS region transcription start site region 151453
Tssr151454 18 61130755 to 61130766 11 + TSS region transcription start site region 151454
Tssr151455 18 61130832 to 61130847 15 + TSS region transcription start site region 151455
Tssr153538 18 61130834 to 61130847 13 - TSS region transcription start site region 153538
Tssr151456 18 61130890 to 61130901 11 + TSS region transcription start site region 151456
Tssr151457 18 61130909 to 61130920 11 + TSS region transcription start site region 151457
Tssr151458 18 61130940 to 61130963 23 + TSS region transcription start site region 151458
Tssr151459 18 61131031 to 61131055 24 + TSS region transcription start site region 151459
Tssr153539 18 61131124 to 61131141 17 - TSS region transcription start site region 153539
Hmgxb3 18 61131279 to 61177050 45771 - protein coding gene HMG box domain containing 3
Gm26403 18 61138509 to 61138613 104 - snRNA gene predicted gene, 26403
Idd21.2 18 61139376 to 74429343 13289967 QTL insulin dependent diabetes susceptibility 21.2
W3q16 18 61139376 to 81448616 20309240 QTL weight 3 weeks QTL 16
D18Mit51 18 61139376 to 61139571 195 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 51
Orgwq9 18 61139376 to 82586603 21447227 QTL organ weight QTL 9
sevr 18 61139376 to 63741971 2602595 heritable phenotypic marker severe runting
Cpgi10105 18 61176367 to 61177605 1238 CpG island CpG island 10105
Tssr153540 18 61176976 to 61176987 11 - TSS region transcription start site region 153540
Tssr153541 18 61176994 to 61177057 63 - TSS region transcription start site region 153541
Tssr153542 18 61196198 to 61196231 33 - TSS region transcription start site region 153542
Tssr153543 18 61196364 to 61196398 34 - TSS region transcription start site region 153543
Tssr153544 18 61196546 to 61196557 11 - TSS region transcription start site region 153544
Slc26a2 18 61196854 to 61211596 14742 - protein coding gene solute carrier family 26 (sulfate transporter), member 2
Tssr153545 18 61197705 to 61197717 12 - TSS region transcription start site region 153545
Cpgi10106 18 61211053 to 61211920 867 CpG island CpG island 10106
Tssr153546 18 61211451 to 61211454 3 - TSS region transcription start site region 153546
Tssr153547 18 61211478 to 61211494 16 - TSS region transcription start site region 153547
Tssr153548 18 61211572 to 61211607 35 - TSS region transcription start site region 153548
Tssr153549 18 61211623 to 61211634 11 - TSS region transcription start site region 153549
Tssr151460 18 61220467 to 61220486 19 + TSS region transcription start site region 151460
Pde6a 18 61220499 to 61289750 69251 + protein coding gene phosphodiesterase 6A, cGMP-specific, rod, alpha
Tssr153550 18 61224330 to 61224336 6 - TSS region transcription start site region 153550
Tssr153551 18 61224342 to 61224357 15 - TSS region transcription start site region 153551
Tssr151461 18 61256794 to 61256800 6 + TSS region transcription start site region 151461
Cpgi10107 18 61256984 to 61257260 276 CpG island CpG island 10107
Rps2-ps10 18 61259039 to 61259987 948 - pseudogene ribosomal protein S2, pseudogene 10
Tssr153552 18 61259987 to 61259988 1 - TSS region transcription start site region 153552
Tssr151462 18 61275002 to 61275041 39 + TSS region transcription start site region 151462
Tssr153553 18 61289713 to 61289715 2 - TSS region transcription start site region 153553
Ppargc1b 18 61298136 to 61400431 102295 - protein coding gene peroxisome proliferative activated receptor, gamma, coactivator 1 beta
Gm46627 18 61298402 to 61302631 4229 + lncRNA gene predicted gene, 46627
Tssr5346 18 61315945 to 61315947 2 - TSS region transcription start site region 5346
Tssr153554 18 61331502 to 61331515 13 - TSS region transcription start site region 153554