Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:61056451-61366454

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W3q15 18 5041119 to 61139571 56098452 QTL weight 3 weeks QTL 15
Msmr2 18 54842801 to 61105798 6262997 QTL MSM lymphoma resistance 2
Pdgfrb 18 61045150 to 61085061 39911 + protein coding gene platelet derived growth factor receptor, beta polypeptide
Tssr151397 18 61061256 to 61061258 2 + TSS region transcription start site region 151397
Tssr153530 18 61065429 to 61065437 8 - TSS region transcription start site region 153530
Tssr151398 18 61065681 to 61065728 47 + TSS region transcription start site region 151398
Cpgi10104 18 61065698 to 61065876 178 CpG island CpG island 10104
Tssr151399 18 61096641 to 61096664 23 + TSS region transcription start site region 151399
Tssr151400 18 61096671 to 61096695 24 + TSS region transcription start site region 151400
Tssr151401 18 61096699 to 61096718 19 + TSS region transcription start site region 151401
Tssr151402 18 61096787 to 61096800 13 + TSS region transcription start site region 151402
Tssr151403 18 61096811 to 61096818 7 + TSS region transcription start site region 151403
Tssr151404 18 61099476 to 61099490 14 + TSS region transcription start site region 151404
Tssr151405 18 61105527 to 61105546 19 + TSS region transcription start site region 151405
Tssr151406 18 61105561 to 61105579 18 + TSS region transcription start site region 151406
Csf1r 18 61105572 to 61132149 26577 + protein coding gene colony stimulating factor 1 receptor
Tssr151407 18 61105596 to 61105603 7 + TSS region transcription start site region 151407
Tssr151408 18 61105616 to 61105635 19 + TSS region transcription start site region 151408
Tssr151409 18 61105640 to 61105654 14 + TSS region transcription start site region 151409
Tssr151410 18 61105662 to 61105667 5 + TSS region transcription start site region 151410
D18Mit140 18 61105665 to 61105798 133 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 140
Tssr151411 18 61105817 to 61105828 11 + TSS region transcription start site region 151411
Tssr151412 18 61105844 to 61105890 46 + TSS region transcription start site region 151412
Tssr151413 18 61105905 to 61105910 5 + TSS region transcription start site region 151413
Tssr151414 18 61106041 to 61106052 11 + TSS region transcription start site region 151414
Tssr153531 18 61107007 to 61107015 8 - TSS region transcription start site region 153531
Tssr153532 18 61107647 to 61107698 51 - TSS region transcription start site region 153532
Tssr153533 18 61108561 to 61108592 31 - TSS region transcription start site region 153533
Tssr153534 18 61108593 to 61108630 37 - TSS region transcription start site region 153534
Tssr151415 18 61108861 to 61108872 11 + TSS region transcription start site region 151415
Tssr151416 18 61108892 to 61108933 41 + TSS region transcription start site region 151416
Tssr151417 18 61109622 to 61109626 4 + TSS region transcription start site region 151417
Tssr151418 18 61109635 to 61109642 7 + TSS region transcription start site region 151418
Tssr151419 18 61109665 to 61109678 13 + TSS region transcription start site region 151419
Tssr151420 18 61109710 to 61109733 23 + TSS region transcription start site region 151420
Tssr153535 18 61109714 to 61109725 11 - TSS region transcription start site region 153535
Tssr151421 18 61109736 to 61109759 23 + TSS region transcription start site region 151421
Tssr153536 18 61109740 to 61109796 56 - TSS region transcription start site region 153536
Tssr151422 18 61109761 to 61109770 9 + TSS region transcription start site region 151422
Tssr151423 18 61109802 to 61109813 11 + TSS region transcription start site region 151423
Tssr153537 18 61109816 to 61109839 23 - TSS region transcription start site region 153537
Tssr151424 18 61109840 to 61109851 11 + TSS region transcription start site region 151424
Tssr151425 18 61110339 to 61110484 145 + TSS region transcription start site region 151425
Tssr151426 18 61111254 to 61111270 16 + TSS region transcription start site region 151426
Tssr151427 18 61111945 to 61111983 38 + TSS region transcription start site region 151427
Tssr151428 18 61112010 to 61112055 45 + TSS region transcription start site region 151428
Tssr151429 18 61112692 to 61112719 27 + TSS region transcription start site region 151429
Tssr151430 18 61112749 to 61112771 22 + TSS region transcription start site region 151430
Tssr151431 18 61114787 to 61114874 87 + TSS region transcription start site region 151431
Tssr151432 18 61117060 to 61117111 51 + TSS region transcription start site region 151432
Tssr151433 18 61117283 to 61117292 9 + TSS region transcription start site region 151433
Mir6983 18 61117468 to 61117531 63 + miRNA gene microRNA 6983
Tssr151434 18 61117543 to 61117571 28 + TSS region transcription start site region 151434
Tssr151435 18 61117629 to 61117646 17 + TSS region transcription start site region 151435
Tssr151436 18 61117661 to 61117672 11 + TSS region transcription start site region 151436
Tssr151437 18 61118945 to 61119014 69 + TSS region transcription start site region 151437
Tssr151438 18 61121969 to 61121979 10 + TSS region transcription start site region 151438
Tssr151439 18 61122018 to 61122026 8 + TSS region transcription start site region 151439
Tssr151440 18 61124216 to 61124281 65 + TSS region transcription start site region 151440
Tssr151441 18 61127751 to 61127817 66 + TSS region transcription start site region 151441
Tssr151442 18 61127836 to 61127925 89 + TSS region transcription start site region 151442
Tssr151443 18 61128994 to 61129007 13 + TSS region transcription start site region 151443
Tssr151444 18 61129048 to 61129077 29 + TSS region transcription start site region 151444
Tssr151445 18 61129259 to 61129272 13 + TSS region transcription start site region 151445
Tssr151446 18 61129273 to 61129296 23 + TSS region transcription start site region 151446
Tssr151447 18 61129328 to 61129353 25 + TSS region transcription start site region 151447
Tssr151448 18 61129699 to 61129718 19 + TSS region transcription start site region 151448
Tssr151449 18 61130429 to 61130440 11 + TSS region transcription start site region 151449
Tssr151450 18 61130550 to 61130577 27 + TSS region transcription start site region 151450
Tssr151451 18 61130609 to 61130640 31 + TSS region transcription start site region 151451
Tssr151452 18 61130644 to 61130697 53 + TSS region transcription start site region 151452
Tssr151453 18 61130710 to 61130724 14 + TSS region transcription start site region 151453
Tssr151454 18 61130755 to 61130766 11 + TSS region transcription start site region 151454
Tssr151455 18 61130832 to 61130847 15 + TSS region transcription start site region 151455
Tssr153538 18 61130834 to 61130847 13 - TSS region transcription start site region 153538
Tssr151456 18 61130890 to 61130901 11 + TSS region transcription start site region 151456
Tssr151457 18 61130909 to 61130920 11 + TSS region transcription start site region 151457
Tssr151458 18 61130940 to 61130963 23 + TSS region transcription start site region 151458
Tssr151459 18 61131031 to 61131055 24 + TSS region transcription start site region 151459
Tssr153539 18 61131124 to 61131141 17 - TSS region transcription start site region 153539
Hmgxb3 18 61131279 to 61177050 45771 - protein coding gene HMG box domain containing 3
Gm26403 18 61138509 to 61138613 104 - snRNA gene predicted gene, 26403
sevr 18 61139376 to 63741971 2602595 heritable phenotypic marker severe runting
Idd21.2 18 61139376 to 74429343 13289967 QTL insulin dependent diabetes susceptibility 21.2
D18Mit51 18 61139376 to 61139571 195 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 51
W3q16 18 61139376 to 81448616 20309240 QTL weight 3 weeks QTL 16
Orgwq9 18 61139376 to 82586603 21447227 QTL organ weight QTL 9
Cpgi10105 18 61176367 to 61177605 1238 CpG island CpG island 10105
Tssr153540 18 61176976 to 61176987 11 - TSS region transcription start site region 153540
Tssr153541 18 61176994 to 61177057 63 - TSS region transcription start site region 153541
Tssr153542 18 61196198 to 61196231 33 - TSS region transcription start site region 153542
Tssr153543 18 61196364 to 61196398 34 - TSS region transcription start site region 153543
Tssr153544 18 61196546 to 61196557 11 - TSS region transcription start site region 153544
Slc26a2 18 61196854 to 61211596 14742 - protein coding gene solute carrier family 26 (sulfate transporter), member 2
Tssr153545 18 61197705 to 61197717 12 - TSS region transcription start site region 153545
Cpgi10106 18 61211053 to 61211920 867 CpG island CpG island 10106
Tssr153546 18 61211451 to 61211454 3 - TSS region transcription start site region 153546
Tssr153547 18 61211478 to 61211494 16 - TSS region transcription start site region 153547
Tssr153548 18 61211572 to 61211607 35 - TSS region transcription start site region 153548
Tssr153549 18 61211623 to 61211634 11 - TSS region transcription start site region 153549
Tssr151460 18 61220467 to 61220486 19 + TSS region transcription start site region 151460
Pde6a 18 61220499 to 61289750 69251 + protein coding gene phosphodiesterase 6A, cGMP-specific, rod, alpha
Tssr153550 18 61224330 to 61224336 6 - TSS region transcription start site region 153550
Tssr153551 18 61224342 to 61224357 15 - TSS region transcription start site region 153551
Tssr151461 18 61256794 to 61256800 6 + TSS region transcription start site region 151461
Cpgi10107 18 61256984 to 61257260 276 CpG island CpG island 10107
Rps2-ps10 18 61259039 to 61259987 948 - pseudogene ribosomal protein S2, pseudogene 10
Tssr153552 18 61259987 to 61259988 1 - TSS region transcription start site region 153552
Tssr151462 18 61275002 to 61275041 39 + TSS region transcription start site region 151462
Tssr153553 18 61289713 to 61289715 2 - TSS region transcription start site region 153553
Ppargc1b 18 61298136 to 61400431 102295 - protein coding gene peroxisome proliferative activated receptor, gamma, coactivator 1 beta
Gm46627 18 61298402 to 61302631 4229 + lncRNA gene predicted gene, 46627
Tssr5346 18 61315945 to 61315947 2 - TSS region transcription start site region 5346
Tssr153554 18 61331502 to 61331515 13 - TSS region transcription start site region 153554
Tssr153555 18 61353391 to 61353408 17 - TSS region transcription start site region 153555