Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:60980270-61110281

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Msmr2 18 54842801 to 61105798 6262997 QTL MSM lymphoma resistance 2
Camk2a 18 60925618 to 60988152 62534 + protein coding gene calcium/calmodulin-dependent protein kinase II alpha
Gm46632 18 60980161 to 60981366 1205 + lncRNA gene predicted gene, 46632
Tssr5345 18 60984134 to 60984143 9 + TSS region transcription start site region 5345
Cpgi10101 18 60984306 to 60984936 630 CpG island CpG island 10101
Tssr151376 18 60984309 to 60984332 23 + TSS region transcription start site region 151376
Tssr151377 18 60984388 to 60984400 12 + TSS region transcription start site region 151377
Tssr151378 18 60984437 to 60984451 14 + TSS region transcription start site region 151378
Tssr151379 18 60985670 to 60985682 12 + TSS region transcription start site region 151379
Tssr151380 18 60985742 to 60985753 11 + TSS region transcription start site region 151380
Tssr151381 18 60985776 to 60985785 9 + TSS region transcription start site region 151381
Tssr151382 18 60985880 to 60985897 17 + TSS region transcription start site region 151382
Tssr151383 18 60985916 to 60985927 11 + TSS region transcription start site region 151383
Tssr151384 18 60985962 to 60985969 7 + TSS region transcription start site region 151384
Tssr151385 18 60986002 to 60986019 17 + TSS region transcription start site region 151385
Tssr151386 18 60986062 to 60986071 9 + TSS region transcription start site region 151386
Tssr151387 18 60986102 to 60986110 8 + TSS region transcription start site region 151387
Tssr151388 18 60986119 to 60986134 15 + TSS region transcription start site region 151388
Tssr151389 18 60987529 to 60987548 19 + TSS region transcription start site region 151389
Tssr151390 18 60987746 to 60987785 39 + TSS region transcription start site region 151390
Tssr151391 18 60987934 to 60987937 3 + TSS region transcription start site region 151391
Slc6a7 18 60995381 to 61014199 18818 - protein coding gene solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
Tssr153520 18 61008551 to 61008555 4 - TSS region transcription start site region 153520
Cpgi10102 18 61013616 to 61014503 887 CpG island CpG island 10102
Tssr153521 18 61014068 to 61014099 31 - TSS region transcription start site region 153521
Tssr153522 18 61014101 to 61014123 22 - TSS region transcription start site region 153522
Tssr153523 18 61014165 to 61014180 15 - TSS region transcription start site region 153523
Tssr153524 18 61014200 to 61014261 61 - TSS region transcription start site region 153524
Cdx1 18 61018862 to 61036199 17337 - protein coding gene caudal type homeobox 1
Cpgi10103 18 61035306 to 61036700 1394 CpG island CpG island 10103
Tssr153525 18 61035755 to 61035764 9 - TSS region transcription start site region 153525
Tssr153526 18 61035775 to 61035818 43 - TSS region transcription start site region 153526
Tssr153527 18 61036189 to 61036210 21 - TSS region transcription start site region 153527
Tssr153528 18 61036211 to 61036226 15 - TSS region transcription start site region 153528
Tssr153529 18 61039932 to 61039958 26 - TSS region transcription start site region 153529
Tssr151392 18 61045139 to 61045206 67 + TSS region transcription start site region 151392
Pdgfrb 18 61045150 to 61085061 39911 + protein coding gene platelet derived growth factor receptor, beta polypeptide
Tssr151393 18 61045239 to 61045248 9 + TSS region transcription start site region 151393
Tssr151394 18 61045270 to 61045281 11 + TSS region transcription start site region 151394
Tssr151395 18 61045303 to 61045313 10 + TSS region transcription start site region 151395
Tssr151396 18 61045422 to 61045442 20 + TSS region transcription start site region 151396
Tssr151397 18 61061256 to 61061258 2 + TSS region transcription start site region 151397
Tssr153530 18 61065429 to 61065437 8 - TSS region transcription start site region 153530
Tssr151398 18 61065681 to 61065728 47 + TSS region transcription start site region 151398
Cpgi10104 18 61065698 to 61065876 178 CpG island CpG island 10104
Tssr151399 18 61096641 to 61096664 23 + TSS region transcription start site region 151399
Tssr151400 18 61096671 to 61096695 24 + TSS region transcription start site region 151400
Tssr151401 18 61096699 to 61096718 19 + TSS region transcription start site region 151401
Tssr151402 18 61096787 to 61096800 13 + TSS region transcription start site region 151402
Tssr151403 18 61096811 to 61096818 7 + TSS region transcription start site region 151403
Tssr151404 18 61099476 to 61099490 14 + TSS region transcription start site region 151404
Tssr151405 18 61105527 to 61105546 19 + TSS region transcription start site region 151405
Tssr151406 18 61105561 to 61105579 18 + TSS region transcription start site region 151406
Csf1r 18 61105572 to 61132149 26577 + protein coding gene colony stimulating factor 1 receptor
Tssr151407 18 61105596 to 61105603 7 + TSS region transcription start site region 151407
Tssr151408 18 61105616 to 61105635 19 + TSS region transcription start site region 151408
Tssr151409 18 61105640 to 61105654 14 + TSS region transcription start site region 151409
Tssr151410 18 61105662 to 61105667 5 + TSS region transcription start site region 151410
D18Mit140 18 61105665 to 61105798 133 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 140
Tssr151411 18 61105817 to 61105828 11 + TSS region transcription start site region 151411
Tssr151412 18 61105844 to 61105890 46 + TSS region transcription start site region 151412
Tssr151413 18 61105905 to 61105910 5 + TSS region transcription start site region 151413
Tssr151414 18 61106041 to 61106052 11 + TSS region transcription start site region 151414
Tssr153531 18 61107007 to 61107015 8 - TSS region transcription start site region 153531
Tssr153532 18 61107647 to 61107698 51 - TSS region transcription start site region 153532
Tssr153533 18 61108561 to 61108592 31 - TSS region transcription start site region 153533
Tssr153534 18 61108593 to 61108630 37 - TSS region transcription start site region 153534
Tssr151415 18 61108861 to 61108872 11 + TSS region transcription start site region 151415
Tssr151416 18 61108892 to 61108933 41 + TSS region transcription start site region 151416
Tssr151417 18 61109622 to 61109626 4 + TSS region transcription start site region 151417
Tssr151418 18 61109635 to 61109642 7 + TSS region transcription start site region 151418
Tssr151419 18 61109665 to 61109678 13 + TSS region transcription start site region 151419
Tssr151420 18 61109710 to 61109733 23 + TSS region transcription start site region 151420
Tssr153535 18 61109714 to 61109725 11 - TSS region transcription start site region 153535
Tssr151421 18 61109736 to 61109759 23 + TSS region transcription start site region 151421
Tssr153536 18 61109740 to 61109796 56 - TSS region transcription start site region 153536
Tssr151422 18 61109761 to 61109770 9 + TSS region transcription start site region 151422
Tssr151423 18 61109802 to 61109813 11 + TSS region transcription start site region 151423
Tssr153537 18 61109816 to 61109839 23 - TSS region transcription start site region 153537
Tssr151424 18 61109840 to 61109851 11 + TSS region transcription start site region 151424