Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:60971211-61101226

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Camk2a 18 60925618 to 60988152 62534 + protein coding gene calcium/calmodulin-dependent protein kinase II alpha
Cpgi10100 18 60977757 to 60978181 424 CpG island CpG island 10100
Gm46632 18 60980161 to 60981366 1205 + lncRNA gene predicted gene, 46632
Tssr5345 18 60984134 to 60984143 9 + TSS region transcription start site region 5345
Cpgi10101 18 60984306 to 60984936 630 CpG island CpG island 10101
Tssr151376 18 60984309 to 60984332 23 + TSS region transcription start site region 151376
Tssr151377 18 60984388 to 60984400 12 + TSS region transcription start site region 151377
Tssr151378 18 60984437 to 60984451 14 + TSS region transcription start site region 151378
Tssr151379 18 60985670 to 60985682 12 + TSS region transcription start site region 151379
Tssr151380 18 60985742 to 60985753 11 + TSS region transcription start site region 151380
Tssr151381 18 60985776 to 60985785 9 + TSS region transcription start site region 151381
Tssr151382 18 60985880 to 60985897 17 + TSS region transcription start site region 151382
Tssr151383 18 60985916 to 60985927 11 + TSS region transcription start site region 151383
Tssr151384 18 60985962 to 60985969 7 + TSS region transcription start site region 151384
Tssr151385 18 60986002 to 60986019 17 + TSS region transcription start site region 151385
Tssr151386 18 60986062 to 60986071 9 + TSS region transcription start site region 151386
Tssr151387 18 60986102 to 60986110 8 + TSS region transcription start site region 151387
Tssr151388 18 60986119 to 60986134 15 + TSS region transcription start site region 151388
Tssr151389 18 60987529 to 60987548 19 + TSS region transcription start site region 151389
Tssr151390 18 60987746 to 60987785 39 + TSS region transcription start site region 151390
Tssr151391 18 60987934 to 60987937 3 + TSS region transcription start site region 151391
Slc6a7 18 60995381 to 61014199 18818 - protein coding gene solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
Tssr153520 18 61008551 to 61008555 4 - TSS region transcription start site region 153520
Cpgi10102 18 61013616 to 61014503 887 CpG island CpG island 10102
Tssr153521 18 61014068 to 61014099 31 - TSS region transcription start site region 153521
Tssr153522 18 61014101 to 61014123 22 - TSS region transcription start site region 153522
Tssr153523 18 61014165 to 61014180 15 - TSS region transcription start site region 153523
Tssr153524 18 61014200 to 61014261 61 - TSS region transcription start site region 153524
Cdx1 18 61018862 to 61036199 17337 - protein coding gene caudal type homeobox 1
Cpgi10103 18 61035306 to 61036700 1394 CpG island CpG island 10103
Tssr153525 18 61035755 to 61035764 9 - TSS region transcription start site region 153525
Tssr153526 18 61035775 to 61035818 43 - TSS region transcription start site region 153526
Tssr153527 18 61036189 to 61036210 21 - TSS region transcription start site region 153527
Tssr153528 18 61036211 to 61036226 15 - TSS region transcription start site region 153528
Tssr153529 18 61039932 to 61039958 26 - TSS region transcription start site region 153529
Tssr151392 18 61045139 to 61045206 67 + TSS region transcription start site region 151392
Pdgfrb 18 61045150 to 61085061 39911 + protein coding gene platelet derived growth factor receptor, beta polypeptide
Tssr151393 18 61045239 to 61045248 9 + TSS region transcription start site region 151393
Tssr151394 18 61045270 to 61045281 11 + TSS region transcription start site region 151394
Tssr151395 18 61045303 to 61045313 10 + TSS region transcription start site region 151395
Tssr151396 18 61045422 to 61045442 20 + TSS region transcription start site region 151396
Tssr151397 18 61061256 to 61061258 2 + TSS region transcription start site region 151397
Tssr153530 18 61065429 to 61065437 8 - TSS region transcription start site region 153530
Tssr151398 18 61065681 to 61065728 47 + TSS region transcription start site region 151398
Cpgi10104 18 61065698 to 61065876 178 CpG island CpG island 10104
Tssr151399 18 61096641 to 61096664 23 + TSS region transcription start site region 151399
Tssr151400 18 61096671 to 61096695 24 + TSS region transcription start site region 151400
Tssr151401 18 61096699 to 61096718 19 + TSS region transcription start site region 151401
Tssr151402 18 61096787 to 61096800 13 + TSS region transcription start site region 151402
Tssr151403 18 61096811 to 61096818 7 + TSS region transcription start site region 151403
Tssr151404 18 61099476 to 61099490 14 + TSS region transcription start site region 151404