Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:60812328-60942337

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd74 18 60803848 to 60812646 8798 + protein coding gene CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
Tssr153504 18 60812326 to 60812347 21 - TSS region transcription start site region 153504
Tssr151354 18 60812340 to 60812353 13 + TSS region transcription start site region 151354
Tssr153505 18 60812348 to 60812355 7 - TSS region transcription start site region 153505
Tssr151355 18 60812367 to 60812378 11 + TSS region transcription start site region 151355
Tssr151356 18 60812390 to 60812391 1 + TSS region transcription start site region 151356
Tssr151357 18 60812407 to 60812418 11 + TSS region transcription start site region 151357
Tssr153506 18 60812419 to 60812422 3 - TSS region transcription start site region 153506
Tssr151358 18 60812435 to 60812458 23 + TSS region transcription start site region 151358
Tssr153507 18 60812472 to 60812490 18 - TSS region transcription start site region 153507
Tssr153508 18 60812495 to 60812529 34 - TSS region transcription start site region 153508
Tssr151359 18 60812495 to 60812504 9 + TSS region transcription start site region 151359
Tssr151360 18 60812509 to 60812520 11 + TSS region transcription start site region 151360
Tssr153509 18 60812535 to 60812562 27 - TSS region transcription start site region 153509
Tssr151361 18 60812557 to 60812566 9 + TSS region transcription start site region 151361
Tssr153510 18 60812596 to 60812605 9 - TSS region transcription start site region 153510
Tssr153511 18 60812641 to 60812649 8 - TSS region transcription start site region 153511
Tcof1 18 60813755 to 60848971 35216 - protein coding gene treacle ribosome biogenesis factor 1
Tssr153512 18 60817166 to 60817170 4 - TSS region transcription start site region 153512
Tssr153513 18 60822951 to 60822962 11 - TSS region transcription start site region 153513
Tssr153514 18 60822981 to 60822992 11 - TSS region transcription start site region 153514
Tssr153515 18 60844138 to 60844153 15 - TSS region transcription start site region 153515
Cpgi10097 18 60848318 to 60849102 784 CpG island CpG island 10097
Tssr153516 18 60848862 to 60848900 38 - TSS region transcription start site region 153516
Tssr153517 18 60848911 to 60848976 65 - TSS region transcription start site region 153517
Tssr153518 18 60848982 to 60848993 11 - TSS region transcription start site region 153518
Gm41744 18 60859208 to 60868826 9618 + lncRNA gene predicted gene, 41744
Tssr153519 18 60877328 to 60877337 9 - TSS region transcription start site region 153519
Gm41745 18 60883072 to 60888997 5925 - lncRNA gene predicted gene, 41745
Cpgi10098 18 60911604 to 60912676 1072 CpG island CpG island 10098
Tssr151362 18 60911727 to 60911755 28 + TSS region transcription start site region 151362
Tssr151363 18 60911757 to 60911779 22 + TSS region transcription start site region 151363
Arsi 18 60911780 to 60918561 6781 + protein coding gene arylsulfatase i
Tssr151364 18 60911805 to 60911847 42 + TSS region transcription start site region 151364
Tssr151365 18 60911955 to 60911973 18 + TSS region transcription start site region 151365
Tssr151366 18 60911984 to 60912002 18 + TSS region transcription start site region 151366
Tssr151367 18 60914623 to 60914632 9 + TSS region transcription start site region 151367
Cpgi10099 18 60925468 to 60925627 159 CpG island CpG island 10099
Tssr151368 18 60925612 to 60925639 27 + TSS region transcription start site region 151368
Camk2a 18 60925618 to 60988152 62534 + protein coding gene calcium/calmodulin-dependent protein kinase II alpha
Tssr151369 18 60925644 to 60925655 11 + TSS region transcription start site region 151369