Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:60788154-62468190

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413 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
W3q15 18 5041119 to 61139571 56098452 QTL weight 3 weeks QTL 15
Msmr2 18 54842801 to 61105798 6262997 QTL MSM lymphoma resistance 2
Tssr153491 18 60793792 to 60793825 33 - TSS region transcription start site region 153491
Tssr151326 18 60803838 to 60803856 18 + TSS region transcription start site region 151326
Cd74 18 60803848 to 60812646 8798 + protein coding gene CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
Tssr151327 18 60803857 to 60803868 11 + TSS region transcription start site region 151327
D18Mit77 18 60803958 to 60804241 283 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 77
Tssr153492 18 60804002 to 60804014 12 - TSS region transcription start site region 153492
Tssr151328 18 60805006 to 60805017 11 + TSS region transcription start site region 151328
Tssr151329 18 60805078 to 60805088 10 + TSS region transcription start site region 151329
Tssr151330 18 60805942 to 60805968 26 + TSS region transcription start site region 151330
Tssr151331 18 60805978 to 60805987 9 + TSS region transcription start site region 151331
Tssr151332 18 60806997 to 60807024 27 + TSS region transcription start site region 151332
Tssr151333 18 60807535 to 60807578 43 + TSS region transcription start site region 151333
Tssr5344 18 60807671 to 60807684 13 + TSS region transcription start site region 5344
Tssr151334 18 60807899 to 60807908 9 + TSS region transcription start site region 151334
Tssr151335 18 60807908 to 60807924 16 + TSS region transcription start site region 151335
Tssr151336 18 60807942 to 60807991 49 + TSS region transcription start site region 151336
Tssr151337 18 60807996 to 60808040 44 + TSS region transcription start site region 151337
Tssr151338 18 60808052 to 60808057 5 + TSS region transcription start site region 151338
Tssr153493 18 60808055 to 60808065 10 - TSS region transcription start site region 153493
Tssr153494 18 60808077 to 60808084 7 - TSS region transcription start site region 153494
Tssr151339 18 60808231 to 60808286 55 + TSS region transcription start site region 151339
Tssr153495 18 60808293 to 60808316 23 - TSS region transcription start site region 153495
D18Mit78 18 60808675 to 60808809 134 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 78
Tssr151340 18 60808907 to 60808920 13 + TSS region transcription start site region 151340
Tssr151341 18 60808930 to 60808955 25 + TSS region transcription start site region 151341
Tssr151342 18 60808962 to 60808981 19 + TSS region transcription start site region 151342
Tssr151343 18 60809022 to 60809066 44 + TSS region transcription start site region 151343
Tssr151344 18 60809972 to 60810023 51 + TSS region transcription start site region 151344
Tssr153496 18 60810001 to 60810024 23 - TSS region transcription start site region 153496
Tssr153497 18 60810031 to 60810074 43 - TSS region transcription start site region 153497
Tssr151345 18 60810311 to 60810376 65 + TSS region transcription start site region 151345
Tssr153498 18 60810354 to 60810410 56 - TSS region transcription start site region 153498
Tssr151346 18 60810383 to 60810395 12 + TSS region transcription start site region 151346
Tssr151347 18 60811306 to 60811357 51 + TSS region transcription start site region 151347
Tssr153499 18 60811316 to 60811359 43 - TSS region transcription start site region 153499
Tssr151348 18 60811398 to 60811410 12 + TSS region transcription start site region 151348
Tssr151349 18 60811418 to 60811452 34 + TSS region transcription start site region 151349
Tssr151350 18 60811844 to 60811899 55 + TSS region transcription start site region 151350
Tssr153500 18 60811882 to 60811917 35 - TSS region transcription start site region 153500
Mir5107 18 60812076 to 60812163 87 + miRNA gene microRNA 5107
Tssr151351 18 60812167 to 60812178 11 + TSS region transcription start site region 151351
Tssr151352 18 60812181 to 60812261 80 + TSS region transcription start site region 151352
Tssr153501 18 60812222 to 60812231 9 - TSS region transcription start site region 153501
Tssr153502 18 60812239 to 60812262 23 - TSS region transcription start site region 153502
Tssr151353 18 60812268 to 60812277 9 + TSS region transcription start site region 151353
Tssr153503 18 60812270 to 60812299 29 - TSS region transcription start site region 153503
Tssr153504 18 60812326 to 60812347 21 - TSS region transcription start site region 153504
Tssr151354 18 60812340 to 60812353 13 + TSS region transcription start site region 151354
Tssr153505 18 60812348 to 60812355 7 - TSS region transcription start site region 153505
Tssr151355 18 60812367 to 60812378 11 + TSS region transcription start site region 151355
Tssr151356 18 60812390 to 60812391 1 + TSS region transcription start site region 151356
Tssr151357 18 60812407 to 60812418 11 + TSS region transcription start site region 151357
Tssr153506 18 60812419 to 60812422 3 - TSS region transcription start site region 153506
Tssr151358 18 60812435 to 60812458 23 + TSS region transcription start site region 151358
Tssr153507 18 60812472 to 60812490 18 - TSS region transcription start site region 153507
Tssr153508 18 60812495 to 60812529 34 - TSS region transcription start site region 153508
Tssr151359 18 60812495 to 60812504 9 + TSS region transcription start site region 151359
Tssr151360 18 60812509 to 60812520 11 + TSS region transcription start site region 151360
Tssr153509 18 60812535 to 60812562 27 - TSS region transcription start site region 153509
Tssr151361 18 60812557 to 60812566 9 + TSS region transcription start site region 151361
Tssr153510 18 60812596 to 60812605 9 - TSS region transcription start site region 153510
Tssr153511 18 60812641 to 60812649 8 - TSS region transcription start site region 153511
Tcof1 18 60813755 to 60848971 35216 - protein coding gene treacle ribosome biogenesis factor 1
Tssr153512 18 60817166 to 60817170 4 - TSS region transcription start site region 153512
Tssr153513 18 60822951 to 60822962 11 - TSS region transcription start site region 153513
Tssr153514 18 60822981 to 60822992 11 - TSS region transcription start site region 153514
Tssr153515 18 60844138 to 60844153 15 - TSS region transcription start site region 153515
Cpgi10097 18 60848318 to 60849102 784 CpG island CpG island 10097
Tssr153516 18 60848862 to 60848900 38 - TSS region transcription start site region 153516
Tssr153517 18 60848911 to 60848976 65 - TSS region transcription start site region 153517
Tssr153518 18 60848982 to 60848993 11 - TSS region transcription start site region 153518
Gm41744 18 60859208 to 60868826 9618 + lncRNA gene predicted gene, 41744
Tssr153519 18 60877328 to 60877337 9 - TSS region transcription start site region 153519
Gm41745 18 60883072 to 60888997 5925 - lncRNA gene predicted gene, 41745
Cpgi10098 18 60911604 to 60912676 1072 CpG island CpG island 10098
Tssr151362 18 60911727 to 60911755 28 + TSS region transcription start site region 151362
Tssr151363 18 60911757 to 60911779 22 + TSS region transcription start site region 151363
Arsi 18 60911780 to 60918561 6781 + protein coding gene arylsulfatase i
Tssr151364 18 60911805 to 60911847 42 + TSS region transcription start site region 151364
Tssr151365 18 60911955 to 60911973 18 + TSS region transcription start site region 151365
Tssr151366 18 60911984 to 60912002 18 + TSS region transcription start site region 151366
Tssr151367 18 60914623 to 60914632 9 + TSS region transcription start site region 151367
Cpgi10099 18 60925468 to 60925627 159 CpG island CpG island 10099
Tssr151368 18 60925612 to 60925639 27 + TSS region transcription start site region 151368
Camk2a 18 60925618 to 60988152 62534 + protein coding gene calcium/calmodulin-dependent protein kinase II alpha
Tssr151369 18 60925644 to 60925655 11 + TSS region transcription start site region 151369
Mir7220 18 60953873 to 60953932 59 + miRNA gene microRNA 7220
Mir6982 18 60958073 to 60958140 67 + miRNA gene microRNA 6982
Tssr151370 18 60963517 to 60963603 86 + TSS region transcription start site region 151370
Tssr151371 18 60963615 to 60963626 11 + TSS region transcription start site region 151371
Tssr151372 18 60963651 to 60963656 5 + TSS region transcription start site region 151372
Tssr151373 18 60963775 to 60963836 61 + TSS region transcription start site region 151373
Tssr151374 18 60963858 to 60963863 5 + TSS region transcription start site region 151374
Tssr151375 18 60969656 to 60969680 24 + TSS region transcription start site region 151375
Cpgi10100 18 60977757 to 60978181 424 CpG island CpG island 10100
Gm46632 18 60980161 to 60981366 1205 + lncRNA gene predicted gene, 46632
Tssr5345 18 60984134 to 60984143 9 + TSS region transcription start site region 5345
Cpgi10101 18 60984306 to 60984936 630 CpG island CpG island 10101
Tssr151376 18 60984309 to 60984332 23 + TSS region transcription start site region 151376
Tssr151377 18 60984388 to 60984400 12 + TSS region transcription start site region 151377
Tssr151378 18 60984437 to 60984451 14 + TSS region transcription start site region 151378
Tssr151379 18 60985670 to 60985682 12 + TSS region transcription start site region 151379
Tssr151380 18 60985742 to 60985753 11 + TSS region transcription start site region 151380
Tssr151381 18 60985776 to 60985785 9 + TSS region transcription start site region 151381
Tssr151382 18 60985880 to 60985897 17 + TSS region transcription start site region 151382
Tssr151383 18 60985916 to 60985927 11 + TSS region transcription start site region 151383
Tssr151384 18 60985962 to 60985969 7 + TSS region transcription start site region 151384
Tssr151385 18 60986002 to 60986019 17 + TSS region transcription start site region 151385
Tssr151386 18 60986062 to 60986071 9 + TSS region transcription start site region 151386
Tssr151387 18 60986102 to 60986110 8 + TSS region transcription start site region 151387
Tssr151388 18 60986119 to 60986134 15 + TSS region transcription start site region 151388
Tssr151389 18 60987529 to 60987548 19 + TSS region transcription start site region 151389
Tssr151390 18 60987746 to 60987785 39 + TSS region transcription start site region 151390
Tssr151391 18 60987934 to 60987937 3 + TSS region transcription start site region 151391
Slc6a7 18 60995381 to 61014199 18818 - protein coding gene solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
Tssr153520 18 61008551 to 61008555 4 - TSS region transcription start site region 153520
Cpgi10102 18 61013616 to 61014503 887 CpG island CpG island 10102
Tssr153521 18 61014068 to 61014099 31 - TSS region transcription start site region 153521
Tssr153522 18 61014101 to 61014123 22 - TSS region transcription start site region 153522
Tssr153523 18 61014165 to 61014180 15 - TSS region transcription start site region 153523
Tssr153524 18 61014200 to 61014261 61 - TSS region transcription start site region 153524
Cdx1 18 61018862 to 61036199 17337 - protein coding gene caudal type homeobox 1
Cpgi10103 18 61035306 to 61036700 1394 CpG island CpG island 10103
Tssr153525 18 61035755 to 61035764 9 - TSS region transcription start site region 153525
Tssr153526 18 61035775 to 61035818 43 - TSS region transcription start site region 153526
Tssr153527 18 61036189 to 61036210 21 - TSS region transcription start site region 153527
Tssr153528 18 61036211 to 61036226 15 - TSS region transcription start site region 153528
Tssr153529 18 61039932 to 61039958 26 - TSS region transcription start site region 153529
Tssr151392 18 61045139 to 61045206 67 + TSS region transcription start site region 151392
Pdgfrb 18 61045150 to 61085061 39911 + protein coding gene platelet derived growth factor receptor, beta polypeptide
Tssr151393 18 61045239 to 61045248 9 + TSS region transcription start site region 151393
Tssr151394 18 61045270 to 61045281 11 + TSS region transcription start site region 151394
Tssr151395 18 61045303 to 61045313 10 + TSS region transcription start site region 151395
Tssr151396 18 61045422 to 61045442 20 + TSS region transcription start site region 151396
Tssr151397 18 61061256 to 61061258 2 + TSS region transcription start site region 151397
Tssr153530 18 61065429 to 61065437 8 - TSS region transcription start site region 153530
Tssr151398 18 61065681 to 61065728 47 + TSS region transcription start site region 151398
Cpgi10104 18 61065698 to 61065876 178 CpG island CpG island 10104
Tssr151399 18 61096641 to 61096664 23 + TSS region transcription start site region 151399
Tssr151400 18 61096671 to 61096695 24 + TSS region transcription start site region 151400
Tssr151401 18 61096699 to 61096718 19 + TSS region transcription start site region 151401
Tssr151402 18 61096787 to 61096800 13 + TSS region transcription start site region 151402
Tssr151403 18 61096811 to 61096818 7 + TSS region transcription start site region 151403
Tssr151404 18 61099476 to 61099490 14 + TSS region transcription start site region 151404
Tssr151405 18 61105527 to 61105546 19 + TSS region transcription start site region 151405
Tssr151406 18 61105561 to 61105579 18 + TSS region transcription start site region 151406
Csf1r 18 61105572 to 61132149 26577 + protein coding gene colony stimulating factor 1 receptor
Tssr151407 18 61105596 to 61105603 7 + TSS region transcription start site region 151407
Tssr151408 18 61105616 to 61105635 19 + TSS region transcription start site region 151408
Tssr151409 18 61105640 to 61105654 14 + TSS region transcription start site region 151409
Tssr151410 18 61105662 to 61105667 5 + TSS region transcription start site region 151410
D18Mit140 18 61105665 to 61105798 133 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 140
Tssr151411 18 61105817 to 61105828 11 + TSS region transcription start site region 151411
Tssr151412 18 61105844 to 61105890 46 + TSS region transcription start site region 151412
Tssr151413 18 61105905 to 61105910 5 + TSS region transcription start site region 151413
Tssr151414 18 61106041 to 61106052 11 + TSS region transcription start site region 151414
Tssr153531 18 61107007 to 61107015 8 - TSS region transcription start site region 153531
Tssr153532 18 61107647 to 61107698 51 - TSS region transcription start site region 153532
Tssr153533 18 61108561 to 61108592 31 - TSS region transcription start site region 153533
Tssr153534 18 61108593 to 61108630 37 - TSS region transcription start site region 153534
Tssr151415 18 61108861 to 61108872 11 + TSS region transcription start site region 151415
Tssr151416 18 61108892 to 61108933 41 + TSS region transcription start site region 151416
Tssr151417 18 61109622 to 61109626 4 + TSS region transcription start site region 151417
Tssr151418 18 61109635 to 61109642 7 + TSS region transcription start site region 151418
Tssr151419 18 61109665 to 61109678 13 + TSS region transcription start site region 151419
Tssr151420 18 61109710 to 61109733 23 + TSS region transcription start site region 151420
Tssr153535 18 61109714 to 61109725 11 - TSS region transcription start site region 153535
Tssr151421 18 61109736 to 61109759 23 + TSS region transcription start site region 151421
Tssr153536 18 61109740 to 61109796 56 - TSS region transcription start site region 153536
Tssr151422 18 61109761 to 61109770 9 + TSS region transcription start site region 151422
Tssr151423 18 61109802 to 61109813 11 + TSS region transcription start site region 151423
Tssr153537 18 61109816 to 61109839 23 - TSS region transcription start site region 153537
Tssr151424 18 61109840 to 61109851 11 + TSS region transcription start site region 151424
Tssr151425 18 61110339 to 61110484 145 + TSS region transcription start site region 151425
Tssr151426 18 61111254 to 61111270 16 + TSS region transcription start site region 151426
Tssr151427 18 61111945 to 61111983 38 + TSS region transcription start site region 151427
Tssr151428 18 61112010 to 61112055 45 + TSS region transcription start site region 151428
Tssr151429 18 61112692 to 61112719 27 + TSS region transcription start site region 151429
Tssr151430 18 61112749 to 61112771 22 + TSS region transcription start site region 151430
Tssr151431 18 61114787 to 61114874 87 + TSS region transcription start site region 151431
Tssr151432 18 61117060 to 61117111 51 + TSS region transcription start site region 151432
Tssr151433 18 61117283 to 61117292 9 + TSS region transcription start site region 151433
Mir6983 18 61117468 to 61117531 63 + miRNA gene microRNA 6983
Tssr151434 18 61117543 to 61117571 28 + TSS region transcription start site region 151434
Tssr151435 18 61117629 to 61117646 17 + TSS region transcription start site region 151435
Tssr151436 18 61117661 to 61117672 11 + TSS region transcription start site region 151436
Tssr151437 18 61118945 to 61119014 69 + TSS region transcription start site region 151437
Tssr151438 18 61121969 to 61121979 10 + TSS region transcription start site region 151438
Tssr151439 18 61122018 to 61122026 8 + TSS region transcription start site region 151439
Tssr151440 18 61124216 to 61124281 65 + TSS region transcription start site region 151440
Tssr151441 18 61127751 to 61127817 66 + TSS region transcription start site region 151441
Tssr151442 18 61127836 to 61127925 89 + TSS region transcription start site region 151442
Tssr151443 18 61128994 to 61129007 13 + TSS region transcription start site region 151443
Tssr151444 18 61129048 to 61129077 29 + TSS region transcription start site region 151444
Tssr151445 18 61129259 to 61129272 13 + TSS region transcription start site region 151445
Tssr151446 18 61129273 to 61129296 23 + TSS region transcription start site region 151446
Tssr151447 18 61129328 to 61129353 25 + TSS region transcription start site region 151447
Tssr151448 18 61129699 to 61129718 19 + TSS region transcription start site region 151448