Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:60490903-60561721

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smim3 18 60474193 to 60501983 27790 - protein coding gene small integral membrane protein 3
Tssr153441 18 60499419 to 60499430 11 - TSS region transcription start site region 153441
Tssr151312 18 60500258 to 60500280 22 + TSS region transcription start site region 151312
Cpgi10089 18 60501032 to 60501818 786 CpG island CpG island 10089
Tssr153442 18 60501515 to 60501620 105 - TSS region transcription start site region 153442
Tssr153443 18 60501631 to 60501646 15 - TSS region transcription start site region 153443
Tssr153444 18 60501667 to 60501677 10 - TSS region transcription start site region 153444
Tssr153445 18 60501693 to 60501745 52 - TSS region transcription start site region 153445
Tssr153446 18 60501748 to 60501772 24 - TSS region transcription start site region 153446
Tssr153447 18 60502464 to 60502477 13 - TSS region transcription start site region 153447
Gm46628 18 60504115 to 60508089 3974 + lncRNA gene predicted gene, 46628
Cpgi10090 18 60525903 to 60526721 818 CpG island CpG island 10090
Tssr153448 18 60525976 to 60525986 10 - TSS region transcription start site region 153448
Tssr153449 18 60526043 to 60526079 36 - TSS region transcription start site region 153449
Tssr153450 18 60526086 to 60526103 17 - TSS region transcription start site region 153450
Dctn4 18 60526185 to 60558766 32581 + protein coding gene dynactin 4
Tssr151313 18 60526194 to 60526234 40 + TSS region transcription start site region 151313
Tssr151314 18 60556413 to 60556455 42 + TSS region transcription start site region 151314
Tssr151315 18 60557738 to 60557759 21 + TSS region transcription start site region 151315
Tssr151316 18 60558192 to 60558197 5 + TSS region transcription start site region 151316
Cpgi10091 18 60560496 to 60561258 762 CpG island CpG island 10091
Tssr151317 18 60560730 to 60560796 66 + TSS region transcription start site region 151317
Rbm22 18 60560786 to 60572729 11943 + protein coding gene RNA binding motif protein 22
Tssr151318 18 60560814 to 60560818 4 + TSS region transcription start site region 151318