Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:60171567-60611578

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138 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23576 18 60174317 to 60174426 109 + miRNA gene predicted gene, 23576
D18Mit28 18 60178048 to 60178271 223 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 28
Hrtfm4 18 60178048 to 60178271 223 QTL heart failure modifier 4
Gm18218 18 60185116 to 60185898 782 + pseudogene predicted gene, 18218
Tssr153429 18 60211551 to 60211562 11 - TSS region transcription start site region 153429
Tssr151240 18 60211970 to 60212033 63 + TSS region transcription start site region 151240
Gm4951 18 60212080 to 60247820 35740 + protein coding gene predicted gene 4951
Tssr151241 18 60212089 to 60212122 33 + TSS region transcription start site region 151241
Tssr151242 18 60212585 to 60212608 23 + TSS region transcription start site region 151242
Tssr151243 18 60213070 to 60213105 35 + TSS region transcription start site region 151243
Tssr151244 18 60213144 to 60213167 23 + TSS region transcription start site region 151244
Tssr151245 18 60214812 to 60214841 29 + TSS region transcription start site region 151245
Gm5970 18 60220843 to 60222058 1215 + pseudogene predicted gene 5970
Tssr151246 18 60222544 to 60222548 4 + TSS region transcription start site region 151246
Tssr151247 18 60223330 to 60223336 6 + TSS region transcription start site region 151247
Tssr151248 18 60226142 to 60226152 10 + TSS region transcription start site region 151248
Tssr151249 18 60229687 to 60229691 4 + TSS region transcription start site region 151249
Tssr151250 18 60231152 to 60231171 19 + TSS region transcription start site region 151250
Tssr151251 18 60235811 to 60235815 4 + TSS region transcription start site region 151251
Tssr153430 18 60238717 to 60238739 22 - TSS region transcription start site region 153430
Tssr151252 18 60238847 to 60238893 46 + TSS region transcription start site region 151252
Tssr151253 18 60238930 to 60238966 36 + TSS region transcription start site region 151253
Tssr151254 18 60242894 to 60242900 6 + TSS region transcription start site region 151254
Tssr151255 18 60246045 to 60246064 19 + TSS region transcription start site region 151255
Tssr151256 18 60246597 to 60246629 32 + TSS region transcription start site region 151256
Tssr151257 18 60246714 to 60246735 21 + TSS region transcription start site region 151257
Tssr151258 18 60247275 to 60247289 14 + TSS region transcription start site region 151258
Tssr151259 18 60247323 to 60247338 15 + TSS region transcription start site region 151259
Gm45947 18 60257185 to 60271350 14165 + lncRNA gene predicted gene, 45947
Gm4841 18 60268301 to 60273267 4966 - protein coding gene predicted gene 4841
Tssr153431 18 60269558 to 60269565 7 - TSS region transcription start site region 153431
Tssr153432 18 60269582 to 60269605 23 - TSS region transcription start site region 153432
Tssr153433 18 60269622 to 60269629 7 - TSS region transcription start site region 153433
Tssr153434 18 60269632 to 60269654 22 - TSS region transcription start site region 153434
Tssr153435 18 60269663 to 60269670 7 - TSS region transcription start site region 153435
Tssr153436 18 60269729 to 60269738 9 - TSS region transcription start site region 153436
Tssr153437 18 60269786 to 60269798 12 - TSS region transcription start site region 153437
Gm46635 18 60271379 to 60283874 12495 + lncRNA gene predicted gene, 46635
Tssr151260 18 60271490 to 60271497 7 + TSS region transcription start site region 151260
Tssr153438 18 60273266 to 60273277 11 - TSS region transcription start site region 153438
Tssr151261 18 60291333 to 60291345 12 + TSS region transcription start site region 151261
Tssr151262 18 60293372 to 60293387 15 + TSS region transcription start site region 151262
F830016B08Rik 18 60293380 to 60303016 9636 + protein coding gene RIKEN cDNA F830016B08 gene
Tssr151263 18 60300005 to 60300008 3 + TSS region transcription start site region 151263
Tssr151264 18 60300965 to 60300983 18 + TSS region transcription start site region 151264
Tssr151265 18 60301204 to 60301215 11 + TSS region transcription start site region 151265
Tssr151266 18 60303826 to 60303838 12 + TSS region transcription start site region 151266
Gm46612 18 60324838 to 60326032 1194 + protein coding gene predicted gene, 46612
Tssr151267 18 60358606 to 60358610 4 + TSS region transcription start site region 151267
Gm8714 18 60361443 to 60362672 1229 + pseudogene predicted gene 8714
Tssr151268 18 60373607 to 60373624 17 + TSS region transcription start site region 151268
Iigp1 18 60376029 to 60392627 16598 + protein coding gene interferon inducible GTPase 1
Tssr151269 18 60376053 to 60376079 26 + TSS region transcription start site region 151269
Tssr151270 18 60376126 to 60376144 18 + TSS region transcription start site region 151270
Tssr151271 18 60376445 to 60376490 45 + TSS region transcription start site region 151271
Tssr151272 18 60376517 to 60376545 28 + TSS region transcription start site region 151272
Tssr151273 18 60376607 to 60376622 15 + TSS region transcription start site region 151273
Tssr151274 18 60379173 to 60379200 27 + TSS region transcription start site region 151274
Tssr151275 18 60379239 to 60379278 39 + TSS region transcription start site region 151275
Tssr151276 18 60379462 to 60379474 12 + TSS region transcription start site region 151276
Tssr151277 18 60382597 to 60382631 34 + TSS region transcription start site region 151277
Tssr151278 18 60382714 to 60382747 33 + TSS region transcription start site region 151278
Tssr151279 18 60383448 to 60383451 3 + TSS region transcription start site region 151279
Tssr151280 18 60383660 to 60383666 6 + TSS region transcription start site region 151280
Tssr151281 18 60385008 to 60385024 16 + TSS region transcription start site region 151281
Tssr151282 18 60385703 to 60385705 2 + TSS region transcription start site region 151282
Tssr151283 18 60386064 to 60386075 11 + TSS region transcription start site region 151283
Tssr5341 18 60386190 to 60386201 11 + TSS region transcription start site region 5341
Tssr151284 18 60389800 to 60389829 29 + TSS region transcription start site region 151284
Tssr151285 18 60389842 to 60389864 22 + TSS region transcription start site region 151285
Tssr151286 18 60390120 to 60390134 14 + TSS region transcription start site region 151286
Tssr151287 18 60390181 to 60390190 9 + TSS region transcription start site region 151287
Tssr151288 18 60390192 to 60390213 21 + TSS region transcription start site region 151288
Tssr151289 18 60390461 to 60390483 22 + TSS region transcription start site region 151289
Tssr151290 18 60390539 to 60390566 27 + TSS region transcription start site region 151290
Tssr151291 18 60390631 to 60390641 10 + TSS region transcription start site region 151291
Tssr151292 18 60390649 to 60390676 27 + TSS region transcription start site region 151292
Tssr151293 18 60390828 to 60390844 16 + TSS region transcription start site region 151293
Tssr151294 18 60390926 to 60390944 18 + TSS region transcription start site region 151294
Tssr151295 18 60391153 to 60391186 33 + TSS region transcription start site region 151295
Tssr151296 18 60391467 to 60391479 12 + TSS region transcription start site region 151296
Tssr151297 18 60391487 to 60391494 7 + TSS region transcription start site region 151297
Tssr151298 18 60391516 to 60391527 11 + TSS region transcription start site region 151298
Tssr151299 18 60391528 to 60391535 7 + TSS region transcription start site region 151299
Tssr151300 18 60391567 to 60391578 11 + TSS region transcription start site region 151300
Tssr151301 18 60391593 to 60391604 11 + TSS region transcription start site region 151301
Tssr151302 18 60391610 to 60391619 9 + TSS region transcription start site region 151302
Tssr151303 18 60392041 to 60392086 45 + TSS region transcription start site region 151303
Tssr151304 18 60392091 to 60392110 19 + TSS region transcription start site region 151304
Tssr151305 18 60392259 to 60392275 16 + TSS region transcription start site region 151305
Tssr153439 18 60392625 to 60392626 1 - TSS region transcription start site region 153439
Tssr5342 18 60426169 to 60426180 11 + TSS region transcription start site region 5342
Gm6960 18 60426292 to 60426934 642 + pseudogene predicted pseudogene 6960
BC023105 18 60441753 to 60442983 1230 + pseudogene cDNA sequence BC023105
Tssr151306 18 60443049 to 60443061 12 + TSS region transcription start site region 151306
Tssr151307 18 60443116 to 60443126 10 + TSS region transcription start site region 151307
Tssr151308 18 60443139 to 60443159 20 + TSS region transcription start site region 151308
Tssr151309 18 60443193 to 60443204 11 + TSS region transcription start site region 151309
Tssr151310 18 60443225 to 60443239 14 + TSS region transcription start site region 151310
Tssr151311 18 60443297 to 60443324 27 + TSS region transcription start site region 151311
Tssr153440 18 60443628 to 60443648 20 - TSS region transcription start site region 153440
Smim3 18 60474193 to 60501983 27790 - protein coding gene small integral membrane protein 3
Tssr153441 18 60499419 to 60499430 11 - TSS region transcription start site region 153441
Tssr151312 18 60500258 to 60500280 22 + TSS region transcription start site region 151312
Cpgi10089 18 60501032 to 60501818 786 CpG island CpG island 10089
Tssr153442 18 60501515 to 60501620 105 - TSS region transcription start site region 153442
Tssr153443 18 60501631 to 60501646 15 - TSS region transcription start site region 153443
Tssr153444 18 60501667 to 60501677 10 - TSS region transcription start site region 153444
Tssr153445 18 60501693 to 60501745 52 - TSS region transcription start site region 153445
Tssr153446 18 60501748 to 60501772 24 - TSS region transcription start site region 153446
Tssr153447 18 60502464 to 60502477 13 - TSS region transcription start site region 153447
Gm46628 18 60504115 to 60508089 3974 + lncRNA gene predicted gene, 46628
Cpgi10090 18 60525903 to 60526721 818 CpG island CpG island 10090
Tssr153448 18 60525976 to 60525986 10 - TSS region transcription start site region 153448
Tssr153449 18 60526043 to 60526079 36 - TSS region transcription start site region 153449
Tssr153450 18 60526086 to 60526103 17 - TSS region transcription start site region 153450
Dctn4 18 60526185 to 60558766 32581 + protein coding gene dynactin 4
Tssr151313 18 60526194 to 60526234 40 + TSS region transcription start site region 151313
Tssr151314 18 60556413 to 60556455 42 + TSS region transcription start site region 151314
Tssr151315 18 60557738 to 60557759 21 + TSS region transcription start site region 151315
Tssr151316 18 60558192 to 60558197 5 + TSS region transcription start site region 151316
Cpgi10091 18 60560496 to 60561258 762 CpG island CpG island 10091
Tssr151317 18 60560730 to 60560796 66 + TSS region transcription start site region 151317
Rbm22 18 60560786 to 60572729 11943 + protein coding gene RNA binding motif protein 22
Tssr151318 18 60560814 to 60560818 4 + TSS region transcription start site region 151318
Tssr151319 18 60566452 to 60566467 15 + TSS region transcription start site region 151319
Myoz3 18 60576316 to 60591788 15472 - protein coding gene myozenin 3
Tssr5343 18 60584708 to 60584711 3 - TSS region transcription start site region 5343
Tssr153451 18 60591763 to 60591778 15 - TSS region transcription start site region 153451
Tssr153452 18 60591783 to 60591867 84 - TSS region transcription start site region 153452
Tssr153453 18 60591883 to 60591900 17 - TSS region transcription start site region 153453
Synpo 18 60593973 to 60660142 66169 - protein coding gene synaptopodin
Cpgi10092 18 60595542 to 60596625 1083 CpG island CpG island 10092
Tssr153454 18 60596766 to 60596768 2 - TSS region transcription start site region 153454
Tssr153455 18 60600436 to 60600461 25 - TSS region transcription start site region 153455
Cpgi10093 18 60602348 to 60602742 394 CpG island CpG island 10093
Tssr153456 18 60610058 to 60610068 10 - TSS region transcription start site region 153456
Tssr153457 18 60610090 to 60610112 22 - TSS region transcription start site region 153457