Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:57473013-58158506

Filter by:
38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctxn3 18 57468516 to 57478133 9617 + protein coding gene cortexin 3
1700066O22Rik 18 57504422 to 57533752 29330 - lncRNA gene RIKEN cDNA 1700066O22 gene
Tssr153410 18 57533715 to 57533720 5 - TSS region transcription start site region 153410
Tssr153411 18 57533749 to 57533761 12 - TSS region transcription start site region 153411
Ccdc192 18 57533780 to 57731065 197285 + protein coding gene coiled-coil domain containing 192
Tssr151205 18 57533842 to 57533866 24 + TSS region transcription start site region 151205
4930511M06Rik 18 57545361 to 57552397 7036 - lncRNA gene RIKEN cDNA 4930511M06 gene
Tssr153412 18 57551873 to 57551905 32 - TSS region transcription start site region 153412
Tssr153413 18 57552337 to 57552348 11 - TSS region transcription start site region 153413
Tssr153414 18 57552368 to 57552415 47 - TSS region transcription start site region 153414
Gm18740 18 57588008 to 57588811 803 - pseudogene predicted gene, 18740
Tssr5331 18 57615569 to 57615571 2 + TSS region transcription start site region 5331
2210409D07Rik 18 57632079 to 57638585 6506 - lncRNA gene RIKEN cDNA 2210409D07 gene
Tssr151206 18 57658038 to 57658041 3 + TSS region transcription start site region 151206
Gm26038 18 57669453 to 57669558 105 - snRNA gene predicted gene, 26038
Gm44491 18 57681814 to 57681909 95 + miRNA gene predicted gene, 44491
Gm19519 18 57774166 to 57779995 5829 - unclassified gene predicted gene, 19519
Gm35751 18 57803013 to 57828506 25493 + protein coding gene predicted gene, 35751
9330166H04Rik 18 57877714 to 57878511 797 unclassified non-coding RNA gene RIKEN cDNA 9330166H04 gene
Cpgi10080 18 57877727 to 57879761 2034 CpG island CpG island 10080
Tssr5332 18 57878291 to 57878309 18 + TSS region transcription start site region 5332
Tssr151207 18 57878596 to 57878607 11 + TSS region transcription start site region 151207
Tssr151208 18 57878620 to 57878637 17 + TSS region transcription start site region 151208
Slc12a2 18 57878678 to 57946821 68143 + protein coding gene solute carrier family 12, member 2
Pwgrq8 18 57888327 to 69216071 11327744 QTL pre-weaning growth rate QTL 8
Tssr5333 18 57911998 to 57912018 20 + TSS region transcription start site region 5333
2210411G17Rik 18 57949906 to 57952095 2189 unclassified gene RIKEN cDNA 2210411G17 gene
2210409O19Rik 18 57954242 to 57955291 1049 unclassified gene RIKEN cDNA 2210409O19 gene
D18Mit181 18 57994795 to 57994941 146 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 181
Fbn2 18 58008623 to 58209926 201303 - protein coding gene fibrillin 2
Tssr5334 18 58009104 to 58009108 4 - TSS region transcription start site region 5334
Tssr153415 18 58009135 to 58009144 9 - TSS region transcription start site region 153415
Tssr153416 18 58072810 to 58072824 14 - TSS region transcription start site region 153416
Tssr153417 18 58072844 to 58072852 8 - TSS region transcription start site region 153417
Tssr153418 18 58072868 to 58072875 7 - TSS region transcription start site region 153418
5930427J20Rik 18 58091069 to 58092484 1415 unclassified gene RIKEN cDNA 5930427J20 gene
Tssr153419 18 58097058 to 58097061 3 - TSS region transcription start site region 153419
Tssr151209 18 58146367 to 58146368 1 + TSS region transcription start site region 151209