Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:57383780-57881065

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc41 18 20820637 to 57457636 36636999 QTL susceptibility to lung cancer 41
Sstapa1 18 46408479 to 57457636 11049157 QTL suseptibility to Staphylococcus aureus infection 1
Prrc1 18 57354733 to 57392719 37986 + protein coding gene proline-rich coiled-coil 1
Gm19500 18 57405270 to 57415246 9976 + unclassified gene predicted gene, 19500
Tssr5329 18 57405298 to 57405326 28 + TSS region transcription start site region 5329
Tssr151197 18 57405331 to 57405358 27 + TSS region transcription start site region 151197
Tssr151198 18 57405397 to 57405432 35 + TSS region transcription start site region 151198
Tssr153409 18 57418228 to 57418235 7 - TSS region transcription start site region 153409
Gm34982 18 57419747 to 57429760 10013 + lncRNA gene predicted gene, 34982
D18Mit124 18 57457487 to 57457636 149 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 124
Eae18 18 57457487 to 82586603 25129116 QTL experimental allergic encephalomyelitis susceptibility 18
Tssr151199 18 57468470 to 57468477 7 + TSS region transcription start site region 151199
Tssr151200 18 57468478 to 57468541 63 + TSS region transcription start site region 151200
Ctxn3 18 57468516 to 57478133 9617 + protein coding gene cortexin 3
Tssr151201 18 57468547 to 57468560 13 + TSS region transcription start site region 151201
Tssr151202 18 57468669 to 57468691 22 + TSS region transcription start site region 151202
Tssr5330 18 57468696 to 57468716 20 + TSS region transcription start site region 5330
Tssr151203 18 57468721 to 57468730 9 + TSS region transcription start site region 151203
Tssr151204 18 57472463 to 57472480 17 + TSS region transcription start site region 151204
1700066O22Rik 18 57504422 to 57533752 29330 - lncRNA gene RIKEN cDNA 1700066O22 gene
Tssr153410 18 57533715 to 57533720 5 - TSS region transcription start site region 153410
Tssr153411 18 57533749 to 57533761 12 - TSS region transcription start site region 153411
Ccdc192 18 57533780 to 57731065 197285 + protein coding gene coiled-coil domain containing 192
Tssr151205 18 57533842 to 57533866 24 + TSS region transcription start site region 151205
4930511M06Rik 18 57545361 to 57552397 7036 - lncRNA gene RIKEN cDNA 4930511M06 gene
Tssr153412 18 57551873 to 57551905 32 - TSS region transcription start site region 153412
Tssr153413 18 57552337 to 57552348 11 - TSS region transcription start site region 153413
Tssr153414 18 57552368 to 57552415 47 - TSS region transcription start site region 153414
Gm18740 18 57588008 to 57588811 803 - pseudogene predicted gene, 18740
Tssr5331 18 57615569 to 57615571 2 + TSS region transcription start site region 5331
2210409D07Rik 18 57632079 to 57638585 6506 - lncRNA gene RIKEN cDNA 2210409D07 gene
Tssr151206 18 57658038 to 57658041 3 + TSS region transcription start site region 151206
Gm26038 18 57669453 to 57669558 105 - snRNA gene predicted gene, 26038
Gm44491 18 57681814 to 57681909 95 + miRNA gene predicted gene, 44491
Gm19519 18 57774166 to 57779995 5829 - unclassified gene predicted gene, 19519
Gm35751 18 57803013 to 57828506 25493 + protein coding gene predicted gene, 35751
9330166H04Rik 18 57877714 to 57878511 797 unclassified non-coding RNA gene RIKEN cDNA 9330166H04 gene
Cpgi10080 18 57877727 to 57879761 2034 CpG island CpG island 10080
Tssr5332 18 57878291 to 57878309 18 + TSS region transcription start site region 5332
Tssr151207 18 57878596 to 57878607 11 + TSS region transcription start site region 151207
Tssr151208 18 57878620 to 57878637 17 + TSS region transcription start site region 151208
Slc12a2 18 57878678 to 57946821 68143 + protein coding gene solute carrier family 12, member 2