Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:56862969-57403003

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
March3 18 56761716 to 56925548 163832 - protein coding gene membrane-associated ring finger (C3HC4) 3
Tssr153398 18 56863040 to 56863044 4 - TSS region transcription start site region 153398
Tssr153399 18 56867598 to 56867603 5 - TSS region transcription start site region 153399
Gm18087 18 56915360 to 56916089 729 - pseudogene predicted gene, 18087
Tssr153400 18 56919232 to 56919255 23 - TSS region transcription start site region 153400
Tssr153401 18 56921285 to 56921295 10 - TSS region transcription start site region 153401
Cpgi10075 18 56924645 to 56926110 1465 CpG island CpG island 10075
Tssr153402 18 56925509 to 56925522 13 - TSS region transcription start site region 153402
Gm34632 18 56925703 to 56967063 41360 + lncRNA gene predicted gene, 34632
Tssr151172 18 56925733 to 56925752 19 + TSS region transcription start site region 151172
Tssr151173 18 56925763 to 56925783 20 + TSS region transcription start site region 151173
Tssr151174 18 56927079 to 56927088 9 + TSS region transcription start site region 151174
Gm10536 18 56936260 to 56940518 4258 + lncRNA gene predicted gene 10536
C330018D20Rik 18 56955833 to 56975368 19535 - protein coding gene RIKEN cDNA C330018D20 gene
Tssr153403 18 56974057 to 56974067 10 - TSS region transcription start site region 153403
Tssr153404 18 56974128 to 56974153 25 - TSS region transcription start site region 153404
Cpgi10076 18 56975102 to 56975490 388 CpG island CpG island 10076
Tssr153405 18 56975333 to 56975376 43 - TSS region transcription start site region 153405
Tssr153406 18 56981181 to 56981221 40 - TSS region transcription start site region 153406
D18Mit238 18 57021757 to 57021878 121 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 238
Tssr151175 18 57095082 to 57095086 4 + TSS region transcription start site region 151175
Gm18739 18 57116730 to 57117281 551 - pseudogene predicted gene, 18739
Gm19486 18 57119571 to 57119930 359 - pseudogene predicted gene, 19486
Cpgi10077 18 57132728 to 57133531 803 CpG island CpG island 10077
Tssr151176 18 57132969 to 57133003 34 + TSS region transcription start site region 151176
Tssr151177 18 57133008 to 57133029 21 + TSS region transcription start site region 151177
Tssr151178 18 57133052 to 57133063 11 + TSS region transcription start site region 151178
Tssr151179 18 57133065 to 57133079 14 + TSS region transcription start site region 151179
Megf10 18 57133090 to 57297467 164377 + protein coding gene multiple EGF-like-domains 10
Tssr151180 18 57133366 to 57133369 3 + TSS region transcription start site region 151180
Tssr151181 18 57133373 to 57133422 49 + TSS region transcription start site region 151181
Tssr151182 18 57133447 to 57133462 15 + TSS region transcription start site region 151182
Tssr151183 18 57133466 to 57133504 38 + TSS region transcription start site region 151183
Tssr151184 18 57142618 to 57142628 10 + TSS region transcription start site region 151184
Tssr151185 18 57142670 to 57142694 24 + TSS region transcription start site region 151185
Tssr151186 18 57142705 to 57142710 5 + TSS region transcription start site region 151186
Tssr151187 18 57142714 to 57142735 21 + TSS region transcription start site region 151187
Tssr151188 18 57142738 to 57142755 17 + TSS region transcription start site region 151188
Tssr151189 18 57142756 to 57142765 9 + TSS region transcription start site region 151189
Tssr151190 18 57142782 to 57142796 14 + TSS region transcription start site region 151190
Tssr151191 18 57142823 to 57142828 5 + TSS region transcription start site region 151191
Tssr151192 18 57142837 to 57142858 21 + TSS region transcription start site region 151192
Gm18322 18 57148987 to 57149791 804 + pseudogene predicted gene, 18322
Tssr153407 18 57244114 to 57244123 9 - TSS region transcription start site region 153407
Cpgi10078 18 57287592 to 57288027 435 CpG island CpG island 10078
Tssr153408 18 57315118 to 57315121 3 - TSS region transcription start site region 153408
Gm18929 18 57335503 to 57338193 2690 + pseudogene predicted gene, 18929
Gm10266 18 57354214 to 57355627 1413 - unclassified gene predicted gene 10266
Cpgi10079 18 57354503 to 57355485 982 CpG island CpG island 10079
Tssr151193 18 57354716 to 57354727 11 + TSS region transcription start site region 151193
Tssr151194 18 57354733 to 57354797 64 + TSS region transcription start site region 151194
Prrc1 18 57354733 to 57392719 37986 + protein coding gene proline-rich coiled-coil 1
Tssr151195 18 57354836 to 57354845 9 + TSS region transcription start site region 151195
Tssr151196 18 57373878 to 57373887 9 + TSS region transcription start site region 151196