Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:56492261-56632283

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gramd3 18 56432132 to 56503792 71660 + protein coding gene GRAM domain containing 3
Tssr153376 18 56498852 to 56498863 11 - TSS region transcription start site region 153376
Tssr151144 18 56503876 to 56503901 25 + TSS region transcription start site region 151144
Tssr153377 18 56504393 to 56504419 26 - TSS region transcription start site region 153377
Tssr153378 18 56504440 to 56504447 7 - TSS region transcription start site region 153378
Tssr151145 18 56504700 to 56504708 8 + TSS region transcription start site region 151145
Tssr153379 18 56505590 to 56505599 9 - TSS region transcription start site region 153379
Tssr153380 18 56505636 to 56505637 1 - TSS region transcription start site region 153380
Tssr5324 18 56505672 to 56505677 5 - TSS region transcription start site region 5324
Tssr5325 18 56505798 to 56505803 5 + TSS region transcription start site region 5325
Tssr151146 18 56505821 to 56505827 6 + TSS region transcription start site region 151146
Gm8642 18 56518240 to 56519379 1139 + pseudogene predicted gene 8642
Aldh7a1 18 56524722 to 56572939 48217 - protein coding gene aldehyde dehydrogenase family 7, member A1
Mir1258 18 56538139 to 56538198 59 + miRNA gene microRNA 1258
Tssr5326 18 56546832 to 56546835 3 - TSS region transcription start site region 5326
Cpgi10069 18 56561996 to 56562751 755 CpG island CpG island 10069
Tssr153381 18 56562187 to 56562209 22 - TSS region transcription start site region 153381
Tssr153382 18 56562215 to 56562254 39 - TSS region transcription start site region 153382
Tssr153383 18 56562261 to 56562283 22 - TSS region transcription start site region 153383
Tssr153384 18 56562501 to 56562535 34 - TSS region transcription start site region 153384
Phax 18 56562569 to 56587712 25143 + protein coding gene phosphorylated adaptor for RNA export
Cpgi10070 18 56572613 to 56573673 1060 CpG island CpG island 10070
Tssr153385 18 56572866 to 56572882 16 - TSS region transcription start site region 153385
Tssr153386 18 56572888 to 56572945 57 - TSS region transcription start site region 153386
Tssr151147 18 56573002 to 56573039 37 + TSS region transcription start site region 151147
Tssr5327 18 56588338 to 56588339 1 + TSS region transcription start site region 5327
Tssr151148 18 56588342 to 56588359 17 + TSS region transcription start site region 151148
Tex43 18 56588350 to 56594782 6432 + protein coding gene testis expressed 43
Cpgi10071 18 56594575 to 56594870 295 CpG island CpG island 10071
Cpgi10072 18 56620993 to 56621244 251 CpG island CpG island 10072