Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:56442866-56702882

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gramd3 18 56432132 to 56503792 71660 + protein coding gene GRAM domain containing 3
Tssr153373 18 56455624 to 56455629 5 - TSS region transcription start site region 153373
Tssr153374 18 56468995 to 56469007 12 - TSS region transcription start site region 153374
Tssr151133 18 56469208 to 56469214 6 + TSS region transcription start site region 151133
Tssr151134 18 56469215 to 56469238 23 + TSS region transcription start site region 151134
Tssr151135 18 56469239 to 56469278 39 + TSS region transcription start site region 151135
Tssr151136 18 56469510 to 56469517 7 + TSS region transcription start site region 151136
Tssr151137 18 56469525 to 56469541 16 + TSS region transcription start site region 151137
Tssr153375 18 56470895 to 56470923 28 - TSS region transcription start site region 153375
Tssr151138 18 56470962 to 56470966 4 + TSS region transcription start site region 151138
Tssr151139 18 56471040 to 56471045 5 + TSS region transcription start site region 151139
Tssr151140 18 56471049 to 56471065 16 + TSS region transcription start site region 151140
Tssr151141 18 56471083 to 56471094 11 + TSS region transcription start site region 151141
Tssr151142 18 56471101 to 56471112 11 + TSS region transcription start site region 151142
Tssr151143 18 56483365 to 56483370 5 + TSS region transcription start site region 151143
Tssr153376 18 56498852 to 56498863 11 - TSS region transcription start site region 153376
Tssr151144 18 56503876 to 56503901 25 + TSS region transcription start site region 151144
Tssr153377 18 56504393 to 56504419 26 - TSS region transcription start site region 153377
Tssr153378 18 56504440 to 56504447 7 - TSS region transcription start site region 153378
Tssr151145 18 56504700 to 56504708 8 + TSS region transcription start site region 151145
Tssr153379 18 56505590 to 56505599 9 - TSS region transcription start site region 153379
Tssr153380 18 56505636 to 56505637 1 - TSS region transcription start site region 153380
Tssr5324 18 56505672 to 56505677 5 - TSS region transcription start site region 5324
Tssr5325 18 56505798 to 56505803 5 + TSS region transcription start site region 5325
Tssr151146 18 56505821 to 56505827 6 + TSS region transcription start site region 151146
Gm8642 18 56518240 to 56519379 1139 + pseudogene predicted gene 8642
Aldh7a1 18 56524722 to 56572939 48217 - protein coding gene aldehyde dehydrogenase family 7, member A1
Mir1258 18 56538139 to 56538198 59 + miRNA gene microRNA 1258
Tssr5326 18 56546832 to 56546835 3 - TSS region transcription start site region 5326
Cpgi10069 18 56561996 to 56562751 755 CpG island CpG island 10069
Tssr153381 18 56562187 to 56562209 22 - TSS region transcription start site region 153381
Tssr153382 18 56562215 to 56562254 39 - TSS region transcription start site region 153382
Tssr153383 18 56562261 to 56562283 22 - TSS region transcription start site region 153383
Tssr153384 18 56562501 to 56562535 34 - TSS region transcription start site region 153384
Phax 18 56562569 to 56587712 25143 + protein coding gene phosphorylated adaptor for RNA export
Cpgi10070 18 56572613 to 56573673 1060 CpG island CpG island 10070
Tssr153385 18 56572866 to 56572882 16 - TSS region transcription start site region 153385
Tssr153386 18 56572888 to 56572945 57 - TSS region transcription start site region 153386
Tssr151147 18 56573002 to 56573039 37 + TSS region transcription start site region 151147
Tssr5327 18 56588338 to 56588339 1 + TSS region transcription start site region 5327
Tssr151148 18 56588342 to 56588359 17 + TSS region transcription start site region 151148
Tex43 18 56588350 to 56594782 6432 + protein coding gene testis expressed 43
Cpgi10071 18 56594575 to 56594870 295 CpG island CpG island 10071
Cpgi10072 18 56620993 to 56621244 251 CpG island CpG island 10072
D18Mit122 18 56661558 to 56661706 148 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 122
Sstapa2 18 56661558 to 66819414 10157856 QTL suseptibility to Staphylococcus aureus infection 2
Tssr153387 18 56675542 to 56675553 11 - TSS region transcription start site region 153387
Tssr151149 18 56675691 to 56675698 7 + TSS region transcription start site region 151149
Tssr151150 18 56676281 to 56676286 5 + TSS region transcription start site region 151150
Tssr151151 18 56676607 to 56676619 12 + TSS region transcription start site region 151151
Tssr151152 18 56676621 to 56676624 3 + TSS region transcription start site region 151152
Tssr151153 18 56676649 to 56676660 11 + TSS region transcription start site region 151153
Tssr151154 18 56676662 to 56676694 32 + TSS region transcription start site region 151154
Tssr151155 18 56676698 to 56676725 27 + TSS region transcription start site region 151155
Tssr153388 18 56677816 to 56677822 6 - TSS region transcription start site region 153388
Tssr151156 18 56677825 to 56677837 12 + TSS region transcription start site region 151156
Cpgi10073 18 56678615 to 56678799 184 CpG island CpG island 10073
Tssr151157 18 56678642 to 56678668 26 + TSS region transcription start site region 151157
Gm41738 18 56688352 to 56689098 746 - lncRNA gene predicted gene, 41738