Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:56120143-56660802

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm23555 18 56192999 to 56193133 134 + snoRNA gene predicted gene, 23555
Gm25476 18 56221834 to 56222018 184 + miRNA gene predicted gene, 25476
Cpgi10066 18 56357882 to 56358061 179 CpG island CpG island 10066
Tssr151125 18 56360851 to 56360862 11 + TSS region transcription start site region 151125
Cpgi10067 18 56369711 to 56369980 269 CpG island CpG island 10067
Gm18527 18 56378986 to 56379508 522 - pseudogene predicted gene, 18527
Tssr151126 18 56387460 to 56387489 29 + TSS region transcription start site region 151126
Gm8629 18 56390143 to 56390802 659 + pseudogene predicted gene 8629
Tssr151127 18 56400317 to 56400362 45 + TSS region transcription start site region 151127
4930511P09Rik 18 56403471 to 56418320 14849 - lncRNA gene RIKEN cDNA 4930511P09 gene
Tssr5323 18 56412139 to 56412150 11 + TSS region transcription start site region 5323
Tssr153369 18 56419108 to 56419117 9 - TSS region transcription start site region 153369
Tssr151128 18 56419168 to 56419184 16 + TSS region transcription start site region 151128
Tssr153370 18 56430161 to 56430167 6 - TSS region transcription start site region 153370
Tssr153371 18 56431824 to 56431854 30 - TSS region transcription start site region 153371
Tssr151129 18 56431895 to 56431905 10 + TSS region transcription start site region 151129
Tssr153372 18 56431919 to 56431934 15 - TSS region transcription start site region 153372
Cpgi10068 18 56431953 to 56432572 619 CpG island CpG island 10068
Tssr151130 18 56432094 to 56432115 21 + TSS region transcription start site region 151130
Tssr151131 18 56432116 to 56432163 47 + TSS region transcription start site region 151131
Gramd3 18 56432132 to 56503792 71660 + protein coding gene GRAM domain containing 3
Tssr151132 18 56432177 to 56432194 17 + TSS region transcription start site region 151132
Tssr153373 18 56455624 to 56455629 5 - TSS region transcription start site region 153373
Tssr153374 18 56468995 to 56469007 12 - TSS region transcription start site region 153374
Tssr151133 18 56469208 to 56469214 6 + TSS region transcription start site region 151133
Tssr151134 18 56469215 to 56469238 23 + TSS region transcription start site region 151134
Tssr151135 18 56469239 to 56469278 39 + TSS region transcription start site region 151135
Tssr151136 18 56469510 to 56469517 7 + TSS region transcription start site region 151136
Tssr151137 18 56469525 to 56469541 16 + TSS region transcription start site region 151137
Tssr153375 18 56470895 to 56470923 28 - TSS region transcription start site region 153375
Tssr151138 18 56470962 to 56470966 4 + TSS region transcription start site region 151138
Tssr151139 18 56471040 to 56471045 5 + TSS region transcription start site region 151139
Tssr151140 18 56471049 to 56471065 16 + TSS region transcription start site region 151140
Tssr151141 18 56471083 to 56471094 11 + TSS region transcription start site region 151141
Tssr151142 18 56471101 to 56471112 11 + TSS region transcription start site region 151142
Tssr151143 18 56483365 to 56483370 5 + TSS region transcription start site region 151143
Tssr153376 18 56498852 to 56498863 11 - TSS region transcription start site region 153376
Tssr151144 18 56503876 to 56503901 25 + TSS region transcription start site region 151144
Tssr153377 18 56504393 to 56504419 26 - TSS region transcription start site region 153377
Tssr153378 18 56504440 to 56504447 7 - TSS region transcription start site region 153378
Tssr151145 18 56504700 to 56504708 8 + TSS region transcription start site region 151145
Tssr153379 18 56505590 to 56505599 9 - TSS region transcription start site region 153379
Tssr153380 18 56505636 to 56505637 1 - TSS region transcription start site region 153380
Tssr5324 18 56505672 to 56505677 5 - TSS region transcription start site region 5324
Tssr5325 18 56505798 to 56505803 5 + TSS region transcription start site region 5325
Tssr151146 18 56505821 to 56505827 6 + TSS region transcription start site region 151146
Gm8642 18 56518240 to 56519379 1139 + pseudogene predicted gene 8642
Aldh7a1 18 56524722 to 56572939 48217 - protein coding gene aldehyde dehydrogenase family 7, member A1
Mir1258 18 56538139 to 56538198 59 + miRNA gene microRNA 1258
Tssr5326 18 56546832 to 56546835 3 - TSS region transcription start site region 5326
Cpgi10069 18 56561996 to 56562751 755 CpG island CpG island 10069
Tssr153381 18 56562187 to 56562209 22 - TSS region transcription start site region 153381
Tssr153382 18 56562215 to 56562254 39 - TSS region transcription start site region 153382
Tssr153383 18 56562261 to 56562283 22 - TSS region transcription start site region 153383
Tssr153384 18 56562501 to 56562535 34 - TSS region transcription start site region 153384
Phax 18 56562569 to 56587712 25143 + protein coding gene phosphorylated adaptor for RNA export
Cpgi10070 18 56572613 to 56573673 1060 CpG island CpG island 10070
Tssr153385 18 56572866 to 56572882 16 - TSS region transcription start site region 153385
Tssr153386 18 56572888 to 56572945 57 - TSS region transcription start site region 153386
Tssr151147 18 56573002 to 56573039 37 + TSS region transcription start site region 151147
Tssr5327 18 56588338 to 56588339 1 + TSS region transcription start site region 5327
Tssr151148 18 56588342 to 56588359 17 + TSS region transcription start site region 151148
Tex43 18 56588350 to 56594782 6432 + protein coding gene testis expressed 43
Cpgi10071 18 56594575 to 56594870 295 CpG island CpG island 10071
Cpgi10072 18 56620993 to 56621244 251 CpG island CpG island 10072