Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:55616428-56448086

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34295 18 55592086 to 55646080 53994 - lncRNA gene predicted gene, 34295
Gm24514 18 55622636 to 55622920 284 - unclassified non-coding RNA gene predicted gene, 24514
Gm41733 18 55692906 to 55701532 8626 + lncRNA gene predicted gene, 41733
Gm41734 18 55726764 to 55733834 7070 - lncRNA gene predicted gene, 41734
Gm26959 18 55745251 to 55746228 977 - pseudogene predicted gene, 26959
Gm34345 18 55763201 to 55768202 5001 - lncRNA gene predicted gene, 34345
Tssr153366 18 55767865 to 55767878 13 - TSS region transcription start site region 153366
Gm8614 18 55837972 to 55838949 977 - pseudogene predicted gene 8614
Tssr153367 18 55839025 to 55839034 9 - TSS region transcription start site region 153367
Gm6942 18 55841569 to 55843178 1609 + pseudogene predicted gene 6942
Gm4230 18 55938152 to 55961878 23726 unclassified gene predicted gene 4230
Tssr151123 18 55939475 to 55939485 10 + TSS region transcription start site region 151123
Tssr153368 18 55939503 to 55939536 33 - TSS region transcription start site region 153368
Tssr151124 18 55939567 to 55939587 20 + TSS region transcription start site region 151124
Gm23335 18 55966852 to 55966941 89 - miRNA gene predicted gene, 23335
D18Mit123 18 55970605 to 55970721 116 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 123
Nabq2 18 55970605 to 55970721 116 QTL nasal bone morphology QTL 2
Gm6944 18 55972286 to 55973291 1005 + pseudogene predicted gene 6944
Gm22484 18 55987222 to 55987527 305 - unclassified non-coding RNA gene predicted gene, 22484
Gm41736 18 56031428 to 56033086 1658 - lncRNA gene predicted gene, 41736
Tssr5322 18 56075443 to 56075446 3 - TSS region transcription start site region 5322
Gm23555 18 56192999 to 56193133 134 + snoRNA gene predicted gene, 23555
Gm25476 18 56221834 to 56222018 184 + miRNA gene predicted gene, 25476
Cpgi10066 18 56357882 to 56358061 179 CpG island CpG island 10066
Tssr151125 18 56360851 to 56360862 11 + TSS region transcription start site region 151125
Cpgi10067 18 56369711 to 56369980 269 CpG island CpG island 10067
Gm18527 18 56378986 to 56379508 522 - pseudogene predicted gene, 18527
Tssr151126 18 56387460 to 56387489 29 + TSS region transcription start site region 151126
Gm8629 18 56390143 to 56390802 659 + pseudogene predicted gene 8629
Tssr151127 18 56400317 to 56400362 45 + TSS region transcription start site region 151127
4930511P09Rik 18 56403471 to 56418320 14849 - lncRNA gene RIKEN cDNA 4930511P09 gene
Tssr5323 18 56412139 to 56412150 11 + TSS region transcription start site region 5323
Tssr153369 18 56419108 to 56419117 9 - TSS region transcription start site region 153369
Tssr151128 18 56419168 to 56419184 16 + TSS region transcription start site region 151128
Tssr153370 18 56430161 to 56430167 6 - TSS region transcription start site region 153370
Tssr153371 18 56431824 to 56431854 30 - TSS region transcription start site region 153371
Tssr151129 18 56431895 to 56431905 10 + TSS region transcription start site region 151129
Tssr153372 18 56431919 to 56431934 15 - TSS region transcription start site region 153372
Cpgi10068 18 56431953 to 56432572 619 CpG island CpG island 10068
Tssr151130 18 56432094 to 56432115 21 + TSS region transcription start site region 151130
Tssr151131 18 56432116 to 56432163 47 + TSS region transcription start site region 151131
Gramd3 18 56432132 to 56503792 71660 + protein coding gene GRAM domain containing 3
Tssr151132 18 56432177 to 56432194 17 + TSS region transcription start site region 151132