Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:55419475-56459485

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34233 18 55419441 to 55461034 41593 + lncRNA gene predicted gene, 34233
Gm37337 18 55516122 to 55517114 992 - unclassified gene predicted gene, 37337
Tssr151122 18 55539754 to 55539766 12 + TSS region transcription start site region 151122
Gm34295 18 55592086 to 55646080 53994 - lncRNA gene predicted gene, 34295
D18Mit218 18 55592720 to 55592849 129 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology-218
Gm24514 18 55622636 to 55622920 284 - unclassified non-coding RNA gene predicted gene, 24514
Gm41733 18 55692906 to 55701532 8626 + lncRNA gene predicted gene, 41733
Gm41734 18 55726764 to 55733834 7070 - lncRNA gene predicted gene, 41734
Gm26959 18 55745251 to 55746228 977 - pseudogene predicted gene, 26959
Gm34345 18 55763201 to 55768202 5001 - lncRNA gene predicted gene, 34345
Tssr153366 18 55767865 to 55767878 13 - TSS region transcription start site region 153366
Gm8614 18 55837972 to 55838949 977 - pseudogene predicted gene 8614
Tssr153367 18 55839025 to 55839034 9 - TSS region transcription start site region 153367
Gm6942 18 55841569 to 55843178 1609 + pseudogene predicted gene 6942
Gm4230 18 55938152 to 55961878 23726 unclassified gene predicted gene 4230
Tssr151123 18 55939475 to 55939485 10 + TSS region transcription start site region 151123
Tssr153368 18 55939503 to 55939536 33 - TSS region transcription start site region 153368
Tssr151124 18 55939567 to 55939587 20 + TSS region transcription start site region 151124
Gm23335 18 55966852 to 55966941 89 - miRNA gene predicted gene, 23335
Nabq2 18 55970605 to 55970721 116 QTL nasal bone morphology QTL 2
D18Mit123 18 55970605 to 55970721 116 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 123
Gm6944 18 55972286 to 55973291 1005 + pseudogene predicted gene 6944
Gm22484 18 55987222 to 55987527 305 - unclassified non-coding RNA gene predicted gene, 22484
Gm41736 18 56031428 to 56033086 1658 - lncRNA gene predicted gene, 41736
Tssr5322 18 56075443 to 56075446 3 - TSS region transcription start site region 5322
Gm23555 18 56192999 to 56193133 134 + snoRNA gene predicted gene, 23555
Gm25476 18 56221834 to 56222018 184 + miRNA gene predicted gene, 25476
Cpgi10066 18 56357882 to 56358061 179 CpG island CpG island 10066
Tssr151125 18 56360851 to 56360862 11 + TSS region transcription start site region 151125
Cpgi10067 18 56369711 to 56369980 269 CpG island CpG island 10067
Gm18527 18 56378986 to 56379508 522 - pseudogene predicted gene, 18527
Tssr151126 18 56387460 to 56387489 29 + TSS region transcription start site region 151126
Gm8629 18 56390143 to 56390802 659 + pseudogene predicted gene 8629
Tssr151127 18 56400317 to 56400362 45 + TSS region transcription start site region 151127
4930511P09Rik 18 56403471 to 56418320 14849 - lncRNA gene RIKEN cDNA 4930511P09 gene
Tssr5323 18 56412139 to 56412150 11 + TSS region transcription start site region 5323
Tssr153369 18 56419108 to 56419117 9 - TSS region transcription start site region 153369
Tssr151128 18 56419168 to 56419184 16 + TSS region transcription start site region 151128
Tssr153370 18 56430161 to 56430167 6 - TSS region transcription start site region 153370
Tssr153371 18 56431824 to 56431854 30 - TSS region transcription start site region 153371
Tssr151129 18 56431895 to 56431905 10 + TSS region transcription start site region 151129
Tssr153372 18 56431919 to 56431934 15 - TSS region transcription start site region 153372
Cpgi10068 18 56431953 to 56432572 619 CpG island CpG island 10068
Tssr151130 18 56432094 to 56432115 21 + TSS region transcription start site region 151130
Tssr151131 18 56432116 to 56432163 47 + TSS region transcription start site region 151131
Gramd3 18 56432132 to 56503792 71660 + protein coding gene GRAM domain containing 3
Tssr151132 18 56432177 to 56432194 17 + TSS region transcription start site region 151132
Tssr153373 18 56455624 to 56455629 5 - TSS region transcription start site region 153373