Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:55009512-55669943

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm4221 18 54990310 to 55079414 89104 + lincRNA gene predicted gene 4221
Gm41731 18 55022585 to 55037586 15001 - lncRNA gene predicted gene, 41731
D18Mit121 18 55037501 to 55037590 89 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 121
Tssr151120 18 55042166 to 55042172 6 + TSS region transcription start site region 151120
Tssr151121 18 55057557 to 55057580 23 + TSS region transcription start site region 151121
5430416G10Rik 18 55081656 to 55083249 1593 unclassified gene RIKEN cDNA 5430416G10 gene
Gm24183 18 55085565 to 55085657 92 - snoRNA gene predicted gene, 24183
Gm34011 18 55126838 to 55131737 4899 - lncRNA gene predicted gene, 34011
Tssr153364 18 55131256 to 55131261 5 - TSS region transcription start site region 153364
Gm34073 18 55143574 to 55143785 211 + unclassified non-coding RNA gene predicted gene, 34073
Gm22597 18 55179840 to 55179919 79 + snRNA gene predicted gene, 22597
Cpgi10065 18 55257135 to 55257348 213 CpG island CpG island 10065
Tssr153365 18 55336356 to 55336357 1 - TSS region transcription start site region 153365
Gm37828 18 55339512 to 55339943 431 + unclassified gene predicted gene, 37828
D18Mit91 18 55380148 to 55380287 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 91
Lscc3 18 55380148 to 55380287 139 QTL lung squamous cell carcinoma 3
Gm34233 18 55419441 to 55461034 41593 + lncRNA gene predicted gene, 34233
Gm37337 18 55516122 to 55517114 992 - unclassified gene predicted gene, 37337
Tssr151122 18 55539754 to 55539766 12 + TSS region transcription start site region 151122
Gm34295 18 55592086 to 55646080 53994 - lncRNA gene predicted gene, 34295
D18Mit218 18 55592720 to 55592849 129 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology-218
Gm24514 18 55622636 to 55622920 284 - unclassified non-coding RNA gene predicted gene, 24514