Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:54571391-54971400

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9330117O12Rik 18 54611744 to 54639870 28126 + lncRNA gene RIKEN cDNA 9330117O12 gene
Tssr151113 18 54611788 to 54611799 11 + TSS region transcription start site region 151113
Tssr151114 18 54640478 to 54640508 30 + TSS region transcription start site region 151114
Cpgi10059 18 54698903 to 54699170 267 CpG island CpG island 10059
Tssr153339 18 54699137 to 54699176 39 - TSS region transcription start site region 153339
Gm5821 18 54766132 to 54766737 605 + pseudogene predicted gene 5821
Tssr151115 18 54771391 to 54771400 9 + TSS region transcription start site region 151115
Gm33732 18 54819414 to 54840255 20841 - lncRNA gene predicted gene, 33732
Tssr153340 18 54840031 to 54840040 9 - TSS region transcription start site region 153340
Tssr153341 18 54840128 to 54840133 5 - TSS region transcription start site region 153341
Tssr153342 18 54840134 to 54840137 3 - TSS region transcription start site region 153342
Szs4 18 54842801 to 85496018 30653217 QTL seizure susceptibility 4
D18Mit90 18 54842801 to 54842928 127 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 90
Msmr2 18 54842801 to 61105798 6262997 QTL MSM lymphoma resistance 2
Zfp608 18 54888045 to 54990180 102135 - protein coding gene zinc finger protein 608
Cpgi10060 18 54899086 to 54899608 522 CpG island CpG island 10060
Tssr153343 18 54901119 to 54901122 3 - TSS region transcription start site region 153343
Cpgi10061 18 54902301 to 54902614 313 CpG island CpG island 10061
Tssr151116 18 54906889 to 54906923 34 + TSS region transcription start site region 151116
Tssr153344 18 54908078 to 54908095 17 - TSS region transcription start site region 153344
Tssr153345 18 54917957 to 54917961 4 - TSS region transcription start site region 153345
AW490107 18 54955928 to 54956295 367 unclassified gene cDNA sequence AW490107
Tssr153346 18 54956713 to 54956725 12 - TSS region transcription start site region 153346
Tssr153347 18 54956743 to 54956754 11 - TSS region transcription start site region 153347
Tssr153348 18 54957774 to 54957789 15 - TSS region transcription start site region 153348
Tssr153349 18 54961647 to 54961667 20 - TSS region transcription start site region 153349
Tssr153350 18 54961679 to 54961691 12 - TSS region transcription start site region 153350
Tssr151117 18 54971038 to 54971072 34 + TSS region transcription start site region 151117
Tssr151118 18 54971292 to 54971294 2 + TSS region transcription start site region 151118