Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:54411744-54839870

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr151109 18 54422286 to 54422340 54 + TSS region transcription start site region 151109
Redrum 18 54422295 to 54452840 30545 + lincRNA gene Redrum, erythroid developmental long intergenic non-protein coding transcript
Tssr151110 18 54422370 to 54422381 11 + TSS region transcription start site region 151110
Gm20567 18 54423862 to 54423967 105 + pseudogene predicted gene, 20567
Tssr151111 18 54427018 to 54427022 4 + TSS region transcription start site region 151111
Tssr151112 18 54454461 to 54454466 5 + TSS region transcription start site region 151112
4933434P08Rik 18 54482729 to 54496387 13658 - lncRNA gene RIKEN cDNA 4933434P08 gene
Tssr153338 18 54496576 to 54496587 11 - TSS region transcription start site region 153338
9330117O12Rik 18 54611744 to 54639870 28126 + lncRNA gene RIKEN cDNA 9330117O12 gene
Tssr151113 18 54611788 to 54611799 11 + TSS region transcription start site region 151113
Tssr151114 18 54640478 to 54640508 30 + TSS region transcription start site region 151114
Cpgi10059 18 54698903 to 54699170 267 CpG island CpG island 10059
Tssr153339 18 54699137 to 54699176 39 - TSS region transcription start site region 153339
Gm5821 18 54766132 to 54766737 605 + pseudogene predicted gene 5821
Tssr151115 18 54771391 to 54771400 9 + TSS region transcription start site region 151115
Gm33732 18 54819414 to 54840255 20841 - lncRNA gene predicted gene, 33732