Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:53859814-54570440

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10058 18 53861612 to 53863154 1542 CpG island CpG island 10058
Tssr153337 18 53861981 to 53861999 18 - TSS region transcription start site region 153337
Tssr151102 18 53862087 to 53862143 56 + TSS region transcription start site region 151102
Csnk1g3 18 53862113 to 53955684 93571 + protein coding gene casein kinase 1, gamma 3
Tssr151103 18 53862229 to 53862319 90 + TSS region transcription start site region 151103
Tssr151104 18 53862320 to 53862341 21 + TSS region transcription start site region 151104
Tssr5320 18 53862392 to 53862403 11 + TSS region transcription start site region 5320
D230007G03Rik 18 53866359 to 53867407 1048 unclassified gene RIKEN cDNA D230007G03 gene
Tssr151105 18 53877724 to 53877756 32 + TSS region transcription start site region 151105
Tssr151106 18 53889134 to 53889147 13 + TSS region transcription start site region 151106
Tssr151107 18 53922091 to 53922107 16 + TSS region transcription start site region 151107
Tssr151108 18 53937345 to 53937346 1 + TSS region transcription start site region 151108
Gm5507 18 53984321 to 53985328 1007 + pseudogene predicted gene 5507
Gm8594 18 54030704 to 54031310 606 - pseudogene predicted gene 8594
Gm41729 18 54209814 to 54220440 10626 - lncRNA gene predicted gene, 41729
Gm41730 18 54277270 to 54281236 3966 - lncRNA gene predicted gene, 41730
Gm33675 18 54337245 to 54339351 2106 + lncRNA gene predicted gene, 33675
Tssr151109 18 54422286 to 54422340 54 + TSS region transcription start site region 151109
Redrum 18 54422295 to 54452840 30545 + lincRNA gene Redrum, erythroid developmental long intergenic non-protein coding transcript
Tssr151110 18 54422370 to 54422381 11 + TSS region transcription start site region 151110
Gm20567 18 54423862 to 54423967 105 + pseudogene predicted gene, 20567
Tssr151111 18 54427018 to 54427022 4 + TSS region transcription start site region 151111
Tssr151112 18 54454461 to 54454466 5 + TSS region transcription start site region 151112
4933434P08Rik 18 54482729 to 54496387 13658 - lncRNA gene RIKEN cDNA 4933434P08 gene
Tssr153338 18 54496576 to 54496587 11 - TSS region transcription start site region 153338