Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:53306341-53518007

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snx24 18 53245662 to 53390823 145161 + protein coding gene sorting nexing 24
Gm18887 18 53305740 to 53307120 1380 + pseudogene predicted gene, 18887
Tssr151093 18 53320976 to 53320978 2 + TSS region transcription start site region 151093
Tssr151094 18 53323375 to 53323384 9 + TSS region transcription start site region 151094
Tssr151095 18 53341637 to 53341671 34 + TSS region transcription start site region 151095
Tssr151096 18 53345236 to 53345240 4 + TSS region transcription start site region 151096
Tssr151097 18 53349520 to 53349532 12 + TSS region transcription start site region 151097
Ppic 18 53406341 to 53418007 11666 - protein coding gene peptidylprolyl isomerase C
Cpgi10051 18 53417356 to 53418269 913 CpG island CpG island 10051
Tssr153328 18 53417965 to 53418003 38 - TSS region transcription start site region 153328
Tssr153329 18 53418004 to 53418044 40 - TSS region transcription start site region 153329
Tssr153330 18 53418055 to 53418066 11 - TSS region transcription start site region 153330
D18Mit54 18 53431874 to 53432021 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 54
Gm41726 18 53451513 to 53463804 12291 - lncRNA gene predicted gene, 41726
Cpgi10052 18 53462691 to 53465620 2929 CpG island CpG island 10052
Tssr151098 18 53463410 to 53463423 13 + TSS region transcription start site region 151098
Tssr151099 18 53463498 to 53463519 21 + TSS region transcription start site region 151099
Tssr151100 18 53463744 to 53463785 41 + TSS region transcription start site region 151100
Tssr151101 18 53464182 to 53464185 3 + TSS region transcription start site region 151101
Prdm6 18 53464546 to 53575907 111361 + protein coding gene PR domain containing 6
Tssr5318 18 53471134 to 53471137 3 + TSS region transcription start site region 5318
Cpgi10053 18 53472366 to 53472564 198 CpG island CpG island 10053
Cpgi10054 18 53473170 to 53473916 746 CpG island CpG island 10054
Tssr153331 18 53498685 to 53498689 4 - TSS region transcription start site region 153331