Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:53165662-53470823

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10049 18 53176026 to 53177215 1189 CpG island CpG island 10049
Tssr151073 18 53176299 to 53176310 11 + TSS region transcription start site region 151073
Tssr151074 18 53176345 to 53176376 31 + TSS region transcription start site region 151074
Snx2 18 53176365 to 53220860 44495 + protein coding gene sorting nexin 2
Tssr151075 18 53181872 to 53181876 4 + TSS region transcription start site region 151075
Tssr151076 18 53193137 to 53193148 11 + TSS region transcription start site region 151076
Tssr151077 18 53195189 to 53195192 3 + TSS region transcription start site region 151077
Tssr151078 18 53210329 to 53210349 20 + TSS region transcription start site region 151078
Tssr151079 18 53213883 to 53213898 15 + TSS region transcription start site region 151079
Tssr151080 18 53213905 to 53213922 17 + TSS region transcription start site region 151080
Gm1859 18 53220969 to 53239462 18493 - pseudogene predicted gene 1859
Cpgi10050 18 53245067 to 53246102 1035 CpG island CpG island 10050
Tssr151081 18 53245578 to 53245607 29 + TSS region transcription start site region 151081
Tssr151082 18 53245618 to 53245634 16 + TSS region transcription start site region 151082
Tssr151083 18 53245638 to 53245659 21 + TSS region transcription start site region 151083
Tssr151084 18 53245662 to 53245673 11 + TSS region transcription start site region 151084
Snx24 18 53245662 to 53390823 145161 + protein coding gene sorting nexing 24
Tssr151085 18 53245736 to 53245786 50 + TSS region transcription start site region 151085
Tssr153326 18 53246653 to 53246684 31 - TSS region transcription start site region 153326
Tssr153327 18 53249676 to 53249693 17 - TSS region transcription start site region 153327
Tssr151086 18 53250930 to 53250934 4 + TSS region transcription start site region 151086
Tssr151087 18 53252168 to 53252179 11 + TSS region transcription start site region 151087
Tssr151088 18 53252404 to 53252416 12 + TSS region transcription start site region 151088
Tssr151089 18 53268549 to 53268565 16 + TSS region transcription start site region 151089
Tssr151090 18 53275829 to 53275835 6 + TSS region transcription start site region 151090
Tssr151091 18 53276591 to 53276595 4 + TSS region transcription start site region 151091
Tssr151092 18 53297302 to 53297318 16 + TSS region transcription start site region 151092
Gm18887 18 53305740 to 53307120 1380 + pseudogene predicted gene, 18887
Tssr151093 18 53320976 to 53320978 2 + TSS region transcription start site region 151093
Tssr151094 18 53323375 to 53323384 9 + TSS region transcription start site region 151094
Tssr151095 18 53341637 to 53341671 34 + TSS region transcription start site region 151095
Tssr151096 18 53345236 to 53345240 4 + TSS region transcription start site region 151096
Tssr151097 18 53349520 to 53349532 12 + TSS region transcription start site region 151097
Ppic 18 53406341 to 53418007 11666 - protein coding gene peptidylprolyl isomerase C
Cpgi10051 18 53417356 to 53418269 913 CpG island CpG island 10051
Tssr153328 18 53417965 to 53418003 38 - TSS region transcription start site region 153328
Tssr153329 18 53418004 to 53418044 40 - TSS region transcription start site region 153329
Tssr153330 18 53418055 to 53418066 11 - TSS region transcription start site region 153330
D18Mit54 18 53431874 to 53432021 147 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 54
Gm41726 18 53451513 to 53463804 12291 - lncRNA gene predicted gene, 41726
Cpgi10052 18 53462691 to 53465620 2929 CpG island CpG island 10052
Tssr151098 18 53463410 to 53463423 13 + TSS region transcription start site region 151098
Tssr151099 18 53463498 to 53463519 21 + TSS region transcription start site region 151099
Tssr151100 18 53463744 to 53463785 41 + TSS region transcription start site region 151100
Tssr151101 18 53464182 to 53464185 3 + TSS region transcription start site region 151101
Prdm6 18 53464546 to 53575907 111361 + protein coding gene PR domain containing 6