MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:52772450-53133235

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sncaip	18	52767811 to 52915935	148124	+	protein coding gene	synuclein, alpha interacting protein (synphilin)
Tssr151067	18	52800226 to 52800235	9	+	TSS region	transcription start site region 151067
Tssr151068	18	52801082 to 52801086	4	+	TSS region	transcription start site region 151068
Hplq2	18	52816637 to 52816637	0		QTL	hot plate latency 2
D18Mit53	18	52833084 to 52833226	142		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 53
Radpf4	18	52833084 to 68645706	15812622		QTL	radiation pulmonary fibrosis 4
Tssr153324	18	52891985 to 52891987	2	-	TSS region	transcription start site region 153324
Tssr5316	18	52906402 to 52906405	3	+	TSS region	transcription start site region 5316
Gm8572	18	52952450 to 52953235	785	+	pseudogene	predicted gene 8572
Cpgi10048	18	52952769 to 52952930	161		CpG island	CpG island 10048
Tssr153325	18	53033613 to 53033645	32	-	TSS region	transcription start site region 153325
Tssr151069	18	53050355 to 53050357	2	+	TSS region	transcription start site region 151069
D18Mit138	18	53058763 to 53058876	113		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 138
D18Mit105	18	53084348 to 53084487	139		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 105
D0Nds5	18	53102695 to 53102847	152		DNA segment	DNA segment, Nuffield Department of Surgery 5
Tssr151070	18	53109282 to 53109332	50	+	TSS region	transcription start site region 151070
Tssr151071	18	53109362 to 53109365	3	+	TSS region	transcription start site region 151071