Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:52651985-53131987

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700034E13Rik 18 52646220 to 52663731 17511 + protein coding gene RIKEN cDNA 1700034E13 gene
Tssr151059 18 52693667 to 52693670 3 + TSS region transcription start site region 151059
Gykl1 18 52693679 to 52695593 1914 + protein coding gene glycerol kinase-like 1
Tssr151060 18 52693682 to 52693713 31 + TSS region transcription start site region 151060
Gm41725 18 52698927 to 52719273 20346 - lncRNA gene predicted gene, 41725
Tssr151061 18 52767695 to 52767737 42 + TSS region transcription start site region 151061
Cpgi10047 18 52767762 to 52769105 1343 CpG island CpG island 10047
Tssr151062 18 52767791 to 52767805 14 + TSS region transcription start site region 151062
Sncaip 18 52767811 to 52915935 148124 + protein coding gene synuclein, alpha interacting protein (synphilin)
Tssr151063 18 52768134 to 52768149 15 + TSS region transcription start site region 151063
Tssr151064 18 52768217 to 52768299 82 + TSS region transcription start site region 151064
Tssr151065 18 52768336 to 52768387 51 + TSS region transcription start site region 151065
Tssr151066 18 52768388 to 52768417 29 + TSS region transcription start site region 151066
Tssr151067 18 52800226 to 52800235 9 + TSS region transcription start site region 151067
Tssr151068 18 52801082 to 52801086 4 + TSS region transcription start site region 151068
Hplq2 18 52816637 to 52816637 0 QTL hot plate latency 2
D18Mit53 18 52833084 to 52833226 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 53
Radpf4 18 52833084 to 68645706 15812622 QTL radiation pulmonary fibrosis 4
Tssr153324 18 52891985 to 52891987 2 - TSS region transcription start site region 153324
Tssr5316 18 52906402 to 52906405 3 + TSS region transcription start site region 5316
Gm8572 18 52952450 to 52953235 785 + pseudogene predicted gene 8572
Cpgi10048 18 52952769 to 52952930 161 CpG island CpG island 10048
Tssr153325 18 53033613 to 53033645 32 - TSS region transcription start site region 153325
Tssr151069 18 53050355 to 53050357 2 + TSS region transcription start site region 151069
D18Mit138 18 53058763 to 53058876 113 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 138
D18Mit105 18 53084348 to 53084487 139 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 105
D0Nds5 18 53102695 to 53102847 152 DNA segment DNA segment, Nuffield Department of Surgery 5
Tssr151070 18 53109282 to 53109332 50 + TSS region transcription start site region 151070
Tssr151071 18 53109362 to 53109365 3 + TSS region transcription start site region 151071