MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:5254767-5414835

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zfp438	18	5210029 to 5334807	124778	-	protein coding gene	zinc finger protein 438
Tssr152321	18	5273257 to 5273276	19	-	TSS region	transcription start site region 152321
Tssr152322	18	5273278 to 5273299	21	-	TSS region	transcription start site region 152322
Tssr5238	18	5273312 to 5273318	6	-	TSS region	transcription start site region 5238
Tssr152323	18	5273321 to 5273325	4	-	TSS region	transcription start site region 152323
Cpgi9672	18	5333852 to 5334977	1125		CpG island	CpG island 9672
Tssr152324	18	5334309 to 5334331	22	-	TSS region	transcription start site region 152324
Tssr152325	18	5334364 to 5334410	46	-	TSS region	transcription start site region 152325
Tssr152326	18	5334739 to 5334751	12	-	TSS region	transcription start site region 152326
Tssr152327	18	5334767 to 5334835	68	-	TSS region	transcription start site region 152327
D18Mit109	18	5336017 to 5336186	169		DNA segment	DNA segment, Chr 18, Massachusetts Institute of Technology 109
Gm50064	18	5348258 to 5361861	13603	-	lincRNA gene	predicted gene, 50064
Gm50065	18	5368541 to 5370482	1941	-	lincRNA gene	predicted gene, 50065
Gm34630	18	5389802 to 5402870	13068	-	lncRNA gene	predicted gene, 34630
Tssr152328	18	5404430 to 5404437	7	-	TSS region	transcription start site region 152328
Tssr152329	18	5404498 to 5404502	4	-	TSS region	transcription start site region 152329
Tssr152330	18	5404575 to 5404589	14	-	TSS region	transcription start site region 152330