Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:52526220-52783731

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lox 18 52516069 to 52529867 13798 - protein coding gene lysyl oxidase
Tssr153312 18 52527741 to 52527764 23 - TSS region transcription start site region 153312
Tssr153313 18 52528348 to 52528385 37 - TSS region transcription start site region 153313
Cpgi10046 18 52528433 to 52529744 1311 CpG island CpG island 10046
Tssr153314 18 52528542 to 52528563 21 - TSS region transcription start site region 153314
Tssr151047 18 52528645 to 52528664 19 + TSS region transcription start site region 151047
Tssr151048 18 52528766 to 52528791 25 + TSS region transcription start site region 151048
Tssr151049 18 52528795 to 52528814 19 + TSS region transcription start site region 151049
Tssr151050 18 52529010 to 52529057 47 + TSS region transcription start site region 151050
Tssr151051 18 52529188 to 52529199 11 + TSS region transcription start site region 151051
Tssr153315 18 52529595 to 52529618 23 - TSS region transcription start site region 153315
Tssr153316 18 52529630 to 52529643 13 - TSS region transcription start site region 153316
Tssr153317 18 52529656 to 52529673 17 - TSS region transcription start site region 153317
Tssr153318 18 52529692 to 52529709 17 - TSS region transcription start site region 153318
Tssr153319 18 52529803 to 52529829 26 - TSS region transcription start site region 153319
Tssr153320 18 52529847 to 52529890 43 - TSS region transcription start site region 153320
Tssr153321 18 52529893 to 52529904 11 - TSS region transcription start site region 153321
Tssr153322 18 52529920 to 52529933 13 - TSS region transcription start site region 153322
Tssr153323 18 52530064 to 52530078 14 - TSS region transcription start site region 153323
Gm18151 18 52533614 to 52534313 699 + pseudogene predicted gene, 18151
D18Mit76 18 52550600 to 52550717 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 76
Tssr151052 18 52559193 to 52559198 5 + TSS region transcription start site region 151052
Tssr151053 18 52559225 to 52559245 20 + TSS region transcription start site region 151053
Gm41724 18 52563614 to 52577324 13710 + lncRNA gene predicted gene, 41724
Tssr151054 18 52565680 to 52565687 7 + TSS region transcription start site region 151054
Tssr151055 18 52615908 to 52615996 88 + TSS region transcription start site region 151055
Zfp474 18 52615915 to 52639830 23915 + protein coding gene zinc finger protein 474
Tssr151056 18 52616024 to 52616033 9 + TSS region transcription start site region 151056
Tssr151057 18 52646181 to 52646185 4 + TSS region transcription start site region 151057
Tssr151058 18 52646206 to 52646225 19 + TSS region transcription start site region 151058
1700034E13Rik 18 52646220 to 52663731 17511 + protein coding gene RIKEN cDNA 1700034E13 gene
Tssr151059 18 52693667 to 52693670 3 + TSS region transcription start site region 151059
Gykl1 18 52693679 to 52695593 1914 + protein coding gene glycerol kinase-like 1
Tssr151060 18 52693682 to 52693713 31 + TSS region transcription start site region 151060
Gm41725 18 52698927 to 52719273 20346 - lncRNA gene predicted gene, 41725
Tssr151061 18 52767695 to 52767737 42 + TSS region transcription start site region 151061
Cpgi10047 18 52767762 to 52769105 1343 CpG island CpG island 10047
Tssr151062 18 52767791 to 52767805 14 + TSS region transcription start site region 151062
Sncaip 18 52767811 to 52915935 148124 + protein coding gene synuclein, alpha interacting protein (synphilin)
Tssr151063 18 52768134 to 52768149 15 + TSS region transcription start site region 151063
Tssr151064 18 52768217 to 52768299 82 + TSS region transcription start site region 151064
Tssr151065 18 52768336 to 52768387 51 + TSS region transcription start site region 151065
Tssr151066 18 52768388 to 52768417 29 + TSS region transcription start site region 151066