MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:50543060-51463787

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pudp	18	50567656 to 50568699	1043	-	protein coding gene	pseudouridine 5-phosphatase
Tssr153302	18	50568663 to 50568706	43	-	TSS region	transcription start site region 153302
Tssr153303	18	50568721 to 50568730	9	-	TSS region	transcription start site region 153303
Tssr153304	18	50568743 to 50568746	3	-	TSS region	transcription start site region 153304
Tssr151036	18	50715660 to 50715710	50	+	TSS region	transcription start site region 151036
Tssr151037	18	50728466 to 50728493	27	+	TSS region	transcription start site region 151037
D18Jcs9	18	50838163 to 50838449	286		DNA segment	DNA segment, Chr 18, John C. Schimenti 9
Gm3815	18	51003060 to 51003787	727	+	pseudogene	predicted gene 3815
D18Dcr7	18	51059988 to 51060089	101		DNA segment	DNA Segment, Chr 18, Derry C. Roopenian 7
Cpgi10043	18	51117324 to 51118177	853		CpG island	CpG island 10043
Tssr151038	18	51117675 to 51117750	75	+	TSS region	transcription start site region 151038
Tssr151039	18	51117754 to 51117765	11	+	TSS region	transcription start site region 151039
Prr16	18	51117898 to 51304641	186743	+	protein coding gene	proline rich 16
Tssr151040	18	51189204 to 51189229	25	+	TSS region	transcription start site region 151040
Tssr151041	18	51231927 to 51231931	4	+	TSS region	transcription start site region 151041
Tssr151042	18	51235506 to 51235507	1	+	TSS region	transcription start site region 151042
Gm25739	18	51254169 to 51254275	106	-	snRNA gene	predicted gene, 25739
Tssr153305	18	51262801 to 51262807	6	-	TSS region	transcription start site region 153305