Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:50497754-51737765

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pudp 18 50567656 to 50568699 1043 - protein coding gene pseudouridine 5-phosphatase
Tssr153302 18 50568663 to 50568706 43 - TSS region transcription start site region 153302
Tssr153303 18 50568721 to 50568730 9 - TSS region transcription start site region 153303
Tssr153304 18 50568743 to 50568746 3 - TSS region transcription start site region 153304
Tssr151036 18 50715660 to 50715710 50 + TSS region transcription start site region 151036
Tssr151037 18 50728466 to 50728493 27 + TSS region transcription start site region 151037
D18Jcs9 18 50838163 to 50838449 286 DNA segment DNA segment, Chr 18, John C. Schimenti 9
Gm3815 18 51003060 to 51003787 727 + pseudogene predicted gene 3815
D18Dcr7 18 51059988 to 51060089 101 DNA segment DNA Segment, Chr 18, Derry C. Roopenian 7
Cpgi10043 18 51117324 to 51118177 853 CpG island CpG island 10043
Tssr151038 18 51117675 to 51117750 75 + TSS region transcription start site region 151038
Tssr151039 18 51117754 to 51117765 11 + TSS region transcription start site region 151039
Prr16 18 51117898 to 51304641 186743 + protein coding gene proline rich 16
Tssr151040 18 51189204 to 51189229 25 + TSS region transcription start site region 151040
Tssr151041 18 51231927 to 51231931 4 + TSS region transcription start site region 151041
Tssr151042 18 51235506 to 51235507 1 + TSS region transcription start site region 151042
Gm25739 18 51254169 to 51254275 106 - snRNA gene predicted gene, 25739
Tssr153305 18 51262801 to 51262807 6 - TSS region transcription start site region 153305
Gm41722 18 51555780 to 51566408 10628 + lncRNA gene predicted gene, 41722
Gm25785 18 51607544 to 51607668 124 - snRNA gene predicted gene, 25785