Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:50002240-50112254

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnfaip8 18 49979427 to 50093229 113802 + protein coding gene tumor necrosis factor, alpha-induced protein 8
Tssr153297 18 50010694 to 50010703 9 - TSS region transcription start site region 153297
Gm33335 18 50013498 to 50026256 12758 - lncRNA gene predicted gene, 33335
Tssr150999 18 50017023 to 50017037 14 + TSS region transcription start site region 150999
Tssr151000 18 50019739 to 50019748 9 + TSS region transcription start site region 151000
Tssr151001 18 50024336 to 50024345 9 + TSS region transcription start site region 151001
Tssr151002 18 50026294 to 50026297 3 + TSS region transcription start site region 151002
Tssr151003 18 50030659 to 50030683 24 + TSS region transcription start site region 151003
Tssr151004 18 50030686 to 50030745 59 + TSS region transcription start site region 151004
Tssr151005 18 50030977 to 50031043 66 + TSS region transcription start site region 151005
Tssr151006 18 50031070 to 50031088 18 + TSS region transcription start site region 151006
Cpgi10039 18 50031188 to 50031421 233 CpG island CpG island 10039
Tssr151007 18 50031296 to 50031324 28 + TSS region transcription start site region 151007
Tssr151008 18 50038832 to 50038836 4 + TSS region transcription start site region 151008
C030005K06Rik 18 50042730 to 50053844 11114 - lncRNA gene RIKEN cDNA C030005K06 gene
Tssr151009 18 50051702 to 50051717 15 + TSS region transcription start site region 151009
Cpgi10040 18 50052965 to 50053902 937 CpG island CpG island 10040
Tssr151010 18 50052997 to 50053004 7 + TSS region transcription start site region 151010
Tssr151011 18 50053014 to 50053024 10 + TSS region transcription start site region 151011
Tssr151012 18 50053394 to 50053404 10 + TSS region transcription start site region 151012
Tssr151013 18 50053436 to 50053457 21 + TSS region transcription start site region 151013
Tssr151014 18 50053466 to 50053523 57 + TSS region transcription start site region 151014
Tssr151015 18 50053541 to 50053544 3 + TSS region transcription start site region 151015
Tssr153298 18 50053648 to 50053662 14 - TSS region transcription start site region 153298
Tssr151016 18 50056983 to 50056997 14 + TSS region transcription start site region 151016
Tssr151017 18 50057105 to 50057118 13 + TSS region transcription start site region 151017
Tssr151018 18 50057240 to 50057254 14 + TSS region transcription start site region 151018
Tssr151019 18 50075810 to 50075816 6 + TSS region transcription start site region 151019
Cpgi10041 18 50083043 to 50083285 242 CpG island CpG island 10041
Tssr151020 18 50083905 to 50083909 4 + TSS region transcription start site region 151020
Tssr151021 18 50095713 to 50095718 5 + TSS region transcription start site region 151021