Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:46759036-47159045

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ap3s1 18 46741876 to 46790826 48950 + protein coding gene adaptor-related protein complex 3, sigma 1 subunit
A430019L02Rik 18 46758556 to 46761976 3420 unclassified gene RIKEN cDNA A430019L02 gene
Gm49971 18 46765214 to 46770108 4894 + unclassified gene predicted gene, 49971
Gm49972 18 46771325 to 46773071 1746 + unclassified gene predicted gene, 49972
Cpgi10028 18 46850002 to 46850737 735 CpG island CpG island 10028
Tssr150962 18 46850034 to 46850059 25 + TSS region transcription start site region 150962
Lvrn 18 46850038 to 46907242 57204 + protein coding gene laeverin
Tssr153268 18 46864031 to 46864047 16 - TSS region transcription start site region 153268
Gm23610 18 46900801 to 46900907 106 + snRNA gene predicted gene, 23610
Tssr150963 18 46906972 to 46906980 8 + TSS region transcription start site region 150963
Gm49973 18 46908558 to 46908925 367 - pseudogene predicted gene, 49973
Tssr150964 18 46918889 to 46918911 22 + TSS region transcription start site region 150964
Tssr150965 18 46921797 to 46921836 39 + TSS region transcription start site region 150965
Arl14epl 18 46921812 to 46934222 12410 + protein coding gene ADP-ribosylation factor-like 14 effector protein-like
Tssr150966 18 46921842 to 46921852 10 + TSS region transcription start site region 150966
Tssr150967 18 46931761 to 46931794 33 + TSS region transcription start site region 150967
Gm3744 18 46941807 to 46942176 369 - pseudogene predicted gene 3744
Gm49974 18 46952563 to 46958680 6117 - bidirectional promoter lncRNA gene predicted gene, 49974
Cpgi10029 18 46958595 to 46959262 667 CpG island CpG island 10029
Commd10 18 46958783 to 47087995 129212 + protein coding gene COMM domain containing 10
Tssr150968 18 46958842 to 46958889 47 + TSS region transcription start site region 150968
Tssr153269 18 46959036 to 46959045 9 - TSS region transcription start site region 153269
Tssr150969 18 46959607 to 46959613 6 + TSS region transcription start site region 150969
Gm22791 18 46985337 to 46985481 144 - snoRNA gene predicted gene, 22791
Tssr150970 18 47040594 to 47040598 4 + TSS region transcription start site region 150970
Tssr150971 18 47056053 to 47056071 18 + TSS region transcription start site region 150971
Tssr153270 18 47070889 to 47070891 2 - TSS region transcription start site region 153270
V125Dq12 18 47100000 to 47100000 0 QTL vitamin D active form serum level QTL 12
Tssr150972 18 47112137 to 47112149 12 + TSS region transcription start site region 150972
Hspe1-rs1 18 47112139 to 47112653 514 + pseudogene heat shock protein 1 (chaperonin 10), related sequence 1
Tssr153271 18 47112349 to 47112361 12 - TSS region transcription start site region 153271
Gm8468 18 47116576 to 47117365 789 + pseudogene predicted gene 8468
Cpgi10030 18 47151138 to 47151467 329 CpG island CpG island 10030
Cpgi10031 18 47154126 to 47154282 156 CpG island CpG island 10031
Gm49975 18 47154189 to 47156186 1997 + unclassified gene predicted gene, 49975
Gm25036 18 47154373 to 47154422 49 + miRNA gene predicted gene, 25036
Tssr150973 18 47155036 to 47155040 4 + TSS region transcription start site region 150973