Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:46641876-46890826

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D18Mit56 18 46644294 to 46644544 250 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 56
Tssr153259 18 46673468 to 46673472 4 - TSS region transcription start site region 153259
Cdo1 18 46713193 to 46728395 15202 - protein coding gene cysteine dioxygenase 1, cytosolic
Tssr153260 18 46713409 to 46713412 3 - TSS region transcription start site region 153260
Tssr153261 18 46713569 to 46713572 3 - TSS region transcription start site region 153261
Tssr153262 18 46715732 to 46715750 18 - TSS region transcription start site region 153262
Tssr153263 18 46717094 to 46717117 23 - TSS region transcription start site region 153263
Tssr153264 18 46726929 to 46726931 2 - TSS region transcription start site region 153264
Cpgi10026 18 46727735 to 46728556 821 CpG island CpG island 10026
Tssr153265 18 46728347 to 46728363 16 - TSS region transcription start site region 153265
Atg12 18 46732417 to 46741839 9422 - protein coding gene autophagy related 12
Tssr150958 18 46741001 to 46741016 15 + TSS region transcription start site region 150958
Cpgi10027 18 46741205 to 46742581 1376 CpG island CpG island 10027
Tssr153266 18 46741512 to 46741524 12 - TSS region transcription start site region 153266
Tssr153267 18 46741544 to 46741584 40 - TSS region transcription start site region 153267
Tssr150959 18 46741852 to 46741900 48 + TSS region transcription start site region 150959
Ap3s1 18 46741876 to 46790826 48950 + protein coding gene adaptor-related protein complex 3, sigma 1 subunit
Tssr150960 18 46741903 to 46741930 27 + TSS region transcription start site region 150960
Tssr150961 18 46742845 to 46742892 47 + TSS region transcription start site region 150961
A430019L02Rik 18 46758556 to 46761976 3420 unclassified gene RIKEN cDNA A430019L02 gene
Gm49971 18 46765214 to 46770108 4894 + unclassified gene predicted gene, 49971
Gm49972 18 46771325 to 46773071 1746 + unclassified gene predicted gene, 49972
Cpgi10028 18 46850002 to 46850737 735 CpG island CpG island 10028
Tssr150962 18 46850034 to 46850059 25 + TSS region transcription start site region 150962
Lvrn 18 46850038 to 46907242 57204 + protein coding gene laeverin
Tssr153268 18 46864031 to 46864047 16 - TSS region transcription start site region 153268