Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:45626007-46256133

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnn2 18 45268860 to 45685887 417027 + protein coding gene potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
Gm46623 18 45655355 to 45676947 21592 - lncRNA gene predicted gene, 46623
A330093E20Rik 18 45683487 to 45896509 213022 - antisense lncRNA gene RIKEN cDNA A330093E20 gene
Gm41718 18 45718472 to 45735438 16966 + lncRNA gene predicted gene, 41718
Tssr153207 18 45895586 to 45895590 4 - TSS region transcription start site region 153207
Tssr153208 18 45934312 to 45934317 5 - TSS region transcription start site region 153208
Gm26262 18 45941007 to 45941133 126 + snoRNA gene predicted gene, 26262
Tssr5308 18 46074939 to 46074942 3 + TSS region transcription start site region 5308
Gm38337 18 46112661 to 46113259 598 - unclassified gene predicted gene, 38337
Tssr153209 18 46141574 to 46141599 25 - TSS region transcription start site region 153209
Tssr153210 18 46141641 to 46141648 7 - TSS region transcription start site region 153210
Tssr153211 18 46161743 to 46161752 9 - TSS region transcription start site region 153211
Trim36 18 46165302 to 46212607 47305 - protein coding gene tripartite motif-containing 36
Tssr153212 18 46175997 to 46176015 18 - TSS region transcription start site region 153212
Tssr150942 18 46176591 to 46176594 3 + TSS region transcription start site region 150942
Tssr153213 18 46179920 to 46179968 48 - TSS region transcription start site region 153213
Cpgi10016 18 46198143 to 46199660 1517 CpG island CpG island 10016
Tssr153214 18 46198810 to 46198824 14 - TSS region transcription start site region 153214
Tssr153215 18 46198838 to 46198863 25 - TSS region transcription start site region 153215
1700018A14Rik 18 46199021 to 46199731 710 + unclassified gene RIKEN cDNA 1700018A14 gene
Cpgi10017 18 46211743 to 46212798 1055 CpG island CpG island 10017
Tssr153216 18 46212451 to 46212461 10 - TSS region transcription start site region 153216
Tssr153217 18 46212569 to 46212590 21 - TSS region transcription start site region 153217
Tssr153218 18 46212595 to 46212634 39 - TSS region transcription start site region 153218
Tssr153219 18 46212813 to 46212821 8 - TSS region transcription start site region 153219
Tssr150943 18 46226026 to 46226034 8 + TSS region transcription start site region 150943
Tssr150944 18 46227080 to 46227092 12 + TSS region transcription start site region 150944
Tssr153220 18 46237859 to 46237879 20 - TSS region transcription start site region 153220
Pggt1b 18 46239949 to 46280850 40901 - protein coding gene protein geranylgeranyltransferase type I, beta subunit