Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:44059466-45019469

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmr27 18 36054514 to 44976451 8921937 QTL leishmaniasis resistance 27
Gm8390 18 44061598 to 44062204 606 + pseudogene predicted gene 8390
Tssr150895 18 44071390 to 44071402 12 + TSS region transcription start site region 150895
Spink6 18 44071393 to 44083610 12217 + protein coding gene serine peptidase inhibitor, Kazal type 6
Tssr5303 18 44073573 to 44073585 12 + TSS region transcription start site region 5303
Tssr153181 18 44088488 to 44088499 11 - TSS region transcription start site region 153181
Tssr150896 18 44101826 to 44101832 6 + TSS region transcription start site region 150896
Tssr150897 18 44104316 to 44104329 13 + TSS region transcription start site region 150897
Tssr150898 18 44104474 to 44104481 7 + TSS region transcription start site region 150898
Tssr150899 18 44104510 to 44104546 36 + TSS region transcription start site region 150899
Spink12 18 44104523 to 44108543 4020 + protein coding gene serine peptidase inhibitor, Kazal type 12
Tssr150900 18 44104548 to 44104559 11 + TSS region transcription start site region 150900
Tssr150901 18 44104649 to 44104666 17 + TSS region transcription start site region 150901
Tssr150902 18 44104684 to 44104698 14 + TSS region transcription start site region 150902
Tssr150903 18 44116189 to 44116196 7 + TSS region transcription start site region 150903
Gm37797 18 44116263 to 44119567 3304 + protein coding gene predicted gene, 37797
Gm10267 18 44156395 to 44159873 3478 - protein coding gene predicted gene 10267
Tssr153182 18 44159929 to 44159938 9 - TSS region transcription start site region 153182
Spinkl 18 44166358 to 44175073 8715 - protein coding gene serine protease inhibitor, Kazal type-like
Tssr153183 18 44173718 to 44173722 4 - TSS region transcription start site region 153183
Tssr5304 18 44174981 to 44175001 20 - TSS region transcription start site region 5304
Tssr153184 18 44175049 to 44175050 1 - TSS region transcription start site region 153184
Tssr153185 18 44175062 to 44175076 14 - TSS region transcription start site region 153185
Tssr153186 18 44175214 to 44175228 14 - TSS region transcription start site region 153186
Spink11 18 44190045 to 44196177 6132 - protein coding gene serine peptidase inhibitor, Kazal type 11
Tssr153187 18 44196167 to 44196179 12 - TSS region transcription start site region 153187
Tssr150904 18 44200806 to 44200810 4 + TSS region transcription start site region 150904
Tssr150905 18 44200845 to 44200849 4 + TSS region transcription start site region 150905
Gm10542 18 44201264 to 44206018 4754 + protein coding gene predicted gene 10542
Tssr153188 18 44253429 to 44253459 30 - TSS region transcription start site region 153188
Tssr153189 18 44253858 to 44253867 9 - TSS region transcription start site region 153189
Tssr153190 18 44255840 to 44255843 3 - TSS region transcription start site region 153190
Gm41716 18 44269161 to 44275331 6170 - lncRNA gene predicted gene, 41716
Tssr150906 18 44270078 to 44270083 5 + TSS region transcription start site region 150906
Tssr150907 18 44270102 to 44270135 33 + TSS region transcription start site region 150907
Npy6r 18 44270127 to 44277700 7573 + protein coding gene neuropeptide Y receptor Y6
Tssr150908 18 44270141 to 44270146 5 + TSS region transcription start site region 150908
Tssr5305 18 44315647 to 44315656 9 + TSS region transcription start site region 5305
Gm41717 18 44315658 to 44327459 11801 + lncRNA gene predicted gene, 41717
Tssr150909 18 44315709 to 44315717 8 + TSS region transcription start site region 150909
Tssr150910 18 44334062 to 44334081 19 + TSS region transcription start site region 150910
Myot 18 44334074 to 44355724 21650 + protein coding gene myotilin
Tssr150911 18 44334114 to 44334123 9 + TSS region transcription start site region 150911
Tssr150912 18 44337173 to 44337206 33 + TSS region transcription start site region 150912
Tssr150913 18 44344428 to 44344433 5 + TSS region transcription start site region 150913
Cpgi10009 18 44380108 to 44381204 1096 CpG island CpG island 10009
Tssr153191 18 44380323 to 44380336 13 - TSS region transcription start site region 153191
Tssr150914 18 44380479 to 44380554 75 + TSS region transcription start site region 150914
Dcp2 18 44380502 to 44424969 44467 + protein coding gene decapping mRNA 2
Tssr150915 18 44380559 to 44380577 18 + TSS region transcription start site region 150915
Tssr150916 18 44380767 to 44380810 43 + TSS region transcription start site region 150916
Tssr150917 18 44380812 to 44380825 13 + TSS region transcription start site region 150917
Tssr150918 18 44381351 to 44381366 15 + TSS region transcription start site region 150918
Tssr150919 18 44411238 to 44411250 12 + TSS region transcription start site region 150919
Tssr150920 18 44423529 to 44423561 32 + TSS region transcription start site region 150920
Mcc 18 44425060 to 44812182 387122 - protein coding gene mutated in colorectal cancers
Tssr153192 18 44429518 to 44429522 4 - TSS region transcription start site region 153192
Tssr150921 18 44539466 to 44539469 3 + TSS region transcription start site region 150921
Tssr153193 18 44555870 to 44555920 50 - TSS region transcription start site region 153193
Tssr153194 18 44555922 to 44555937 15 - TSS region transcription start site region 153194
Tssr150922 18 44556802 to 44556807 5 + TSS region transcription start site region 150922
Tssr150923 18 44571154 to 44571156 2 + TSS region transcription start site region 150923
Tssr153195 18 44574658 to 44574670 12 - TSS region transcription start site region 153195
Tssr153196 18 44601720 to 44601737 17 - TSS region transcription start site region 153196
Tssr153197 18 44633754 to 44633758 4 - TSS region transcription start site region 153197
Tssr150924 18 44634148 to 44634181 33 + TSS region transcription start site region 150924
Tssr153198 18 44641414 to 44641417 3 - TSS region transcription start site region 153198
D18Mit235 18 44651007 to 44651125 118 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 235
Tssr153199 18 44652165 to 44652169 4 - TSS region transcription start site region 153199
D18Mit237 18 44654073 to 44654159 86 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 237
Cpgi10010 18 44661515 to 44662589 1074 CpG island CpG island 10010
A930012L18Rik 18 44661665 to 44676271 14606 + antisense lncRNA gene RIKEN cDNA A930012L18 gene
Tssr150925 18 44662113 to 44662124 11 + TSS region transcription start site region 150925
Tssr153200 18 44662214 to 44662244 30 - TSS region transcription start site region 153200
Tssr153201 18 44662251 to 44662264 13 - TSS region transcription start site region 153201
Tssr153202 18 44662268 to 44662306 38 - TSS region transcription start site region 153202
Tssr153203 18 44662318 to 44662338 20 - TSS region transcription start site region 153203
Tssr150926 18 44811656 to 44811693 37 + TSS region transcription start site region 150926
Cpgi10011 18 44811826 to 44812509 683 CpG island CpG island 10011
Gm43425 18 44821769 to 44825059 3290 + lincRNA gene predicted gene 43425
Ythdc2 18 44827746 to 44889724 61978 + protein coding gene YTH domain containing 2
Cpgi10012 18 44828179 to 44829148 969 CpG island CpG island 10012
Tssr150927 18 44828452 to 44828470 18 + TSS region transcription start site region 150927
Tssr150928 18 44828471 to 44828536 65 + TSS region transcription start site region 150928
Tssr153204 18 44828883 to 44828894 11 - TSS region transcription start site region 153204
Tssr153205 18 44828897 to 44828933 36 - TSS region transcription start site region 153205
4833422B07Rik 18 44883072 to 44884428 1356 unclassified gene RIKEN cDNA 4833422B07 gene
D18Mit35 18 44976313 to 44976451 138 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 35
Lmr13 18 44976313 to 44976451 138 QTL leishmaniasis resistance 13
Thcr 18 44997537 to 68645706 23648169 QTL T helper cell response
Mhysq5 18 44997537 to 44997672 135 QTL male hybrid sterility QTL 5
D18Mit149 18 44997537 to 44997672 135 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 149