Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:43763235-44222501

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgb3a2 18 43764289 to 43767399 3110 + protein coding gene secretoglobin, family 3A, member 2
Tssr150893 18 43764317 to 43764333 16 + TSS region transcription start site region 150893
Gm94 18 43777196 to 43792878 15682 - protein coding gene predicted gene 94
Tssr153180 18 43792873 to 43792881 8 - TSS region transcription start site region 153180
Gm41715 18 43844642 to 43870414 25772 + lncRNA gene predicted gene, 41715
Tssr150894 18 43963234 to 43963252 18 + TSS region transcription start site region 150894
Spink5 18 43963235 to 44022501 59266 + protein coding gene serine peptidase inhibitor, Kazal type 5
Spink14 18 44027869 to 44032208 4339 + protein coding gene serine peptidase inhibitor, Kazal type 14
Gm8390 18 44061598 to 44062204 606 + pseudogene predicted gene 8390
Tssr150895 18 44071390 to 44071402 12 + TSS region transcription start site region 150895
Spink6 18 44071393 to 44083610 12217 + protein coding gene serine peptidase inhibitor, Kazal type 6
Tssr5303 18 44073573 to 44073585 12 + TSS region transcription start site region 5303
Tssr153181 18 44088488 to 44088499 11 - TSS region transcription start site region 153181
Tssr150896 18 44101826 to 44101832 6 + TSS region transcription start site region 150896
Tssr150897 18 44104316 to 44104329 13 + TSS region transcription start site region 150897
Tssr150898 18 44104474 to 44104481 7 + TSS region transcription start site region 150898
Tssr150899 18 44104510 to 44104546 36 + TSS region transcription start site region 150899
Spink12 18 44104523 to 44108543 4020 + protein coding gene serine peptidase inhibitor, Kazal type 12
Tssr150900 18 44104548 to 44104559 11 + TSS region transcription start site region 150900
Tssr150901 18 44104649 to 44104666 17 + TSS region transcription start site region 150901
Tssr150902 18 44104684 to 44104698 14 + TSS region transcription start site region 150902
Tssr150903 18 44116189 to 44116196 7 + TSS region transcription start site region 150903
Gm37797 18 44116263 to 44119567 3304 + protein coding gene predicted gene, 37797
Gm10267 18 44156395 to 44159873 3478 - protein coding gene predicted gene 10267
Tssr153182 18 44159929 to 44159938 9 - TSS region transcription start site region 153182
Spinkl 18 44166358 to 44175073 8715 - protein coding gene serine protease inhibitor, Kazal type-like
Tssr153183 18 44173718 to 44173722 4 - TSS region transcription start site region 153183
Tssr5304 18 44174981 to 44175001 20 - TSS region transcription start site region 5304
Tssr153184 18 44175049 to 44175050 1 - TSS region transcription start site region 153184
Tssr153185 18 44175062 to 44175076 14 - TSS region transcription start site region 153185
Tssr153186 18 44175214 to 44175228 14 - TSS region transcription start site region 153186
Spink11 18 44190045 to 44196177 6132 - protein coding gene serine peptidase inhibitor, Kazal type 11
Tssr153187 18 44196167 to 44196179 12 - TSS region transcription start site region 153187
Tssr150904 18 44200806 to 44200810 4 + TSS region transcription start site region 150904
Tssr150905 18 44200845 to 44200849 4 + TSS region transcription start site region 150905
Gm10542 18 44201264 to 44206018 4754 + protein coding gene predicted gene 10542