Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:41894043-42104055

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prelid2 18 41875696 to 41951194 75498 - protein coding gene PRELI domain containing 2
Gm18371 18 41892994 to 41895410 2416 - pseudogene predicted gene, 18371
Tssr5296 18 41916564 to 41916569 5 + TSS region transcription start site region 5296
D18Mit104 18 41932519 to 41932667 148 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 104
Cpgi9988 18 41950730 to 41951439 709 CpG island CpG island 9988
Tssr153106 18 41951161 to 41951180 19 - TSS region transcription start site region 153106
Tssr153107 18 41951187 to 41951232 45 - TSS region transcription start site region 153107
Tssr153108 18 41982538 to 41982574 36 - TSS region transcription start site region 153108
Grxcr2 18 41986201 to 41999049 12848 - protein coding gene glutaredoxin, cysteine rich 2
Tssr153109 18 41998973 to 41998976 3 - TSS region transcription start site region 153109
Tssr153110 18 41999043 to 41999055 12 - TSS region transcription start site region 153110
Cpgi9989 18 42016566 to 42016827 261 CpG island CpG island 9989
Tssr5297 18 42052455 to 42052466 11 + TSS region transcription start site region 5297
Tssr150863 18 42052475 to 42052487 12 + TSS region transcription start site region 150863
D18Mit114 18 42052827 to 42052968 141 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 114
D18Mit113 18 42052827 to 42052945 118 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 113
Tssr150864 18 42053648 to 42053662 14 + TSS region transcription start site region 150864
Sh3rf2 18 42053667 to 42158960 105293 + protein coding gene SH3 domain containing ring finger 2
Tssr150865 18 42053675 to 42053689 14 + TSS region transcription start site region 150865
Tssr150866 18 42053692 to 42053724 32 + TSS region transcription start site region 150866
Tssr150867 18 42053727 to 42053738 11 + TSS region transcription start site region 150867