MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 18:40476269-40976709

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Kctd16	18	40258361 to 40531168	272807	+	protein coding gene	potassium channel tetramerisation domain containing 16
Tssr150855	18	40512986 to 40513003	17	+	TSS region	transcription start site region 150855
Tssr150856	18	40513024 to 40513027	3	+	TSS region	transcription start site region 150856
Tssr150857	18	40523096 to 40523107	11	+	TSS region	transcription start site region 150857
Tssr150858	18	40530749 to 40530770	21	+	TSS region	transcription start site region 150858
C030017B01Rik	18	40539785 to 40543017	3232		unclassified gene	RIKEN cDNA C030017B01 gene
Tssr150859	18	40541397 to 40541408	11	+	TSS region	transcription start site region 150859
Tssr150860	18	40721507 to 40721516	9	+	TSS region	transcription start site region 150860
Gm31205	18	40721525 to 40778105	56580	+	lncRNA gene	predicted gene, 31205
Rps19-ps13	18	40726269 to 40726709	440	+	pseudogene	ribosomal protein S19, pseudogene 13
Gm41710	18	40780069 to 40811782	31713	+	lncRNA gene	predicted gene, 41710
Tssr150861	18	40792714 to 40792716	2	+	TSS region	transcription start site region 150861
Gm22515	18	40801161 to 40801465	304	-	unclassified non-coding RNA gene	predicted gene, 22515
Tssr153103	18	40923767 to 40923778	11	-	TSS region	transcription start site region 153103
Tssr153104	18	40923805 to 40923818	13	-	TSS region	transcription start site region 153104
Tssr153105	18	40923843 to 40923864	21	-	TSS region	transcription start site region 153105
Gm22483	18	40963279 to 40963552	273	+	unclassified non-coding RNA gene	predicted gene, 22483