Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:39949865-40474399

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Yipf5 18 40204865 to 40219399 14534 - protein coding gene Yip1 domain family, member 5
Cpgi9985 18 40218867 to 40219700 833 CpG island CpG island 9985
Tssr153102 18 40219324 to 40219369 45 - TSS region transcription start site region 153102
Gm31087 18 40242893 to 40246936 4043 - lncRNA gene predicted gene, 31087
Tssr150842 18 40256289 to 40256309 20 + TSS region transcription start site region 150842
Cpgi9986 18 40256702 to 40257129 427 CpG island CpG island 9986
Tssr150843 18 40256870 to 40256882 12 + TSS region transcription start site region 150843
Tssr150844 18 40256947 to 40256951 4 + TSS region transcription start site region 150844
Tssr150845 18 40256960 to 40257018 58 + TSS region transcription start site region 150845
2900055J20Rik 18 40256962 to 40257684 722 + unclassified gene RIKEN cDNA 2900055J20 gene
Tssr150846 18 40257031 to 40257042 11 + TSS region transcription start site region 150846
Kctd16 18 40258361 to 40531168 272807 + protein coding gene potassium channel tetramerisation domain containing 16
Tssr150847 18 40265807 to 40265814 7 + TSS region transcription start site region 150847
Tssr150848 18 40270540 to 40270549 9 + TSS region transcription start site region 150848
Tssr150849 18 40271674 to 40271677 3 + TSS region transcription start site region 150849
Tssr150850 18 40306068 to 40306080 12 + TSS region transcription start site region 150850
Tssr150851 18 40306235 to 40306248 13 + TSS region transcription start site region 150851
Tssr150852 18 40308205 to 40308229 24 + TSS region transcription start site region 150852
Tssr150853 18 40332478 to 40332483 5 + TSS region transcription start site region 150853
Tssr150854 18 40333235 to 40333239 4 + TSS region transcription start site region 150854
D18Mit227 18 40427082 to 40427203 121 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 227