Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:39488578-40058594

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nr3c1 18 39410545 to 39491301 80756 - protein coding gene nuclear receptor subfamily 3, group C, member 1
Tssr153078 18 39488724 to 39488752 28 - TSS region transcription start site region 153078
Cpgi9983 18 39488861 to 39491922 3061 CpG island CpG island 9983
Tssr153079 18 39489157 to 39489164 7 - TSS region transcription start site region 153079
Tssr153080 18 39489242 to 39489297 55 - TSS region transcription start site region 153080
Tssr153081 18 39489520 to 39489542 22 - TSS region transcription start site region 153081
Tssr153082 18 39489776 to 39489868 92 - TSS region transcription start site region 153082
Tssr153083 18 39489880 to 39489915 35 - TSS region transcription start site region 153083
Tssr153084 18 39490411 to 39490424 13 - TSS region transcription start site region 153084
Tssr153085 18 39490437 to 39490458 21 - TSS region transcription start site region 153085
Tssr153086 18 39490649 to 39490717 68 - TSS region transcription start site region 153086
Tssr153087 18 39490887 to 39490910 23 - TSS region transcription start site region 153087
Tssr153088 18 39491553 to 39491563 10 - TSS region transcription start site region 153088
Tssr153089 18 39496585 to 39496600 15 - TSS region transcription start site region 153089
Tssr150833 18 39496733 to 39496744 11 + TSS region transcription start site region 150833
Tssr150834 18 39496749 to 39496763 14 + TSS region transcription start site region 150834
Tssr153090 18 39514150 to 39514165 15 - TSS region transcription start site region 153090
Tssr153091 18 39519189 to 39519205 16 - TSS region transcription start site region 153091
Tssr153092 18 39519214 to 39519240 26 - TSS region transcription start site region 153092
Tssr153093 18 39519253 to 39519262 9 - TSS region transcription start site region 153093
Tssr153094 18 39519265 to 39519274 9 - TSS region transcription start site region 153094
Tssr153095 18 39519282 to 39519303 21 - TSS region transcription start site region 153095
Tssr153096 18 39519324 to 39519333 9 - TSS region transcription start site region 153096
Tssr153097 18 39519381 to 39519395 14 - TSS region transcription start site region 153097
Tssr153098 18 39519415 to 39519425 10 - TSS region transcription start site region 153098
Tssr153099 18 39519601 to 39519614 13 - TSS region transcription start site region 153099
Tssr150835 18 39519812 to 39519847 35 + TSS region transcription start site region 150835
Tssr150836 18 39539339 to 39539360 21 + TSS region transcription start site region 150836
Gm30909 18 39539369 to 39556103 16734 + lncRNA gene predicted gene, 30909
Gm30961 18 39636305 to 39656217 19912 + lncRNA gene predicted gene, 30961
D18Mit201 18 39646486 to 39646600 114 DNA segment DNA Segment, Chr 18, Massachusetts Institute of Technology 201
Tssr153100 18 39661208 to 39661214 6 - TSS region transcription start site region 153100
D18Mit89 18 39677426 to 39677568 142 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 89
Tssr5294 18 39701518 to 39701537 19 + TSS region transcription start site region 5294
Tssr153101 18 39734957 to 39734963 6 - TSS region transcription start site region 153101
Cpgi9984 18 39773426 to 39773955 529 CpG island CpG island 9984
Pabpc2 18 39773497 to 39776082 2585 + protein coding gene poly(A) binding protein, cytoplasmic 2
Tssr150837 18 39773505 to 39773576 71 + TSS region transcription start site region 150837
Tssr150838 18 39773578 to 39773594 16 + TSS region transcription start site region 150838
Tssr150839 18 39773600 to 39773605 5 + TSS region transcription start site region 150839
Tssr150840 18 39774833 to 39774870 37 + TSS region transcription start site region 150840
Tssr150841 18 39791921 to 39791925 4 + TSS region transcription start site region 150841
Gm41707 18 39804830 to 39871031 66201 + lncRNA gene predicted gene, 41707
Gm41708 18 39906454 to 39929433 22979 - lncRNA gene predicted gene, 41708