Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38999220-39471441

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap26 18 38617646 to 39376285 758639 + protein coding gene Rho GTPase activating protein 26
Gm41705 18 38996913 to 39012464 15551 + lncRNA gene predicted gene, 41705
D18Mit193 18 39016654 to 39016771 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 193
Tssr150819 18 39024142 to 39024181 39 + TSS region transcription start site region 150819
Tssr5293 18 39026683 to 39026686 3 + TSS region transcription start site region 5293
Tssr150820 18 39031543 to 39031544 1 + TSS region transcription start site region 150820
Tssr150821 18 39072539 to 39072542 3 + TSS region transcription start site region 150821
Tssr153068 18 39137916 to 39137919 3 - TSS region transcription start site region 153068
Tssr150822 18 39174870 to 39174916 46 + TSS region transcription start site region 150822
Tssr153069 18 39185104 to 39185111 7 - TSS region transcription start site region 153069
Tssr153070 18 39185153 to 39185158 5 - TSS region transcription start site region 153070
Gm30572 18 39234220 to 39236441 2221 - lncRNA gene predicted gene, 30572
Gm15336 18 39246247 to 39302690 56443 - antisense lncRNA gene predicted gene 15336
Tssr150823 18 39251831 to 39251836 5 + TSS region transcription start site region 150823
Tssr150824 18 39291432 to 39291440 8 + TSS region transcription start site region 150824
Tssr150825 18 39291446 to 39291451 5 + TSS region transcription start site region 150825
Tssr150826 18 39306725 to 39306736 11 + TSS region transcription start site region 150826
Gm15333 18 39341601 to 39341964 363 - pseudogene predicted gene 15333
Tssr150827 18 39353496 to 39353498 2 + TSS region transcription start site region 150827
Tssr150828 18 39353560 to 39353564 4 + TSS region transcription start site region 150828
Tssr150829 18 39353671 to 39353677 6 + TSS region transcription start site region 150829
Gm15337 18 39357817 to 39371084 13267 - antisense lncRNA gene predicted gene 15337
Tssr150830 18 39362561 to 39362597 36 + TSS region transcription start site region 150830
Tssr150831 18 39362920 to 39362936 16 + TSS region transcription start site region 150831
Tssr150832 18 39371970 to 39371976 6 + TSS region transcription start site region 150832
Tssr153071 18 39389420 to 39389431 11 - TSS region transcription start site region 153071
Cpgi9982 18 39391150 to 39391507 357 CpG island CpG island 9982
Nr3c1 18 39410545 to 39491301 80756 - protein coding gene nuclear receptor subfamily 3, group C, member 1
Tssr153072 18 39466084 to 39466096 12 - TSS region transcription start site region 153072