Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38873093-39113107

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fgf1 18 38838673 to 38929404 90731 - protein coding gene fibroblast growth factor 1
Tssr153059 18 38881427 to 38881455 28 - TSS region transcription start site region 153059
Tssr153060 18 38881512 to 38881519 7 - TSS region transcription start site region 153060
Gm5820 18 38892456 to 38981623 89167 + protein coding gene predicted gene 5820
Tssr153061 18 38918642 to 38918710 68 - TSS region transcription start site region 153061
Tssr153062 18 38929133 to 38929145 12 - TSS region transcription start site region 153062
Tssr153063 18 38929148 to 38929168 20 - TSS region transcription start site region 153063
Tssr153064 18 38929173 to 38929199 26 - TSS region transcription start site region 153064
Tssr153065 18 38929378 to 38929396 18 - TSS region transcription start site region 153065
Tssr153066 18 38929401 to 38929410 9 - TSS region transcription start site region 153066
Tssr153067 18 38929462 to 38929480 18 - TSS region transcription start site region 153067
Tssr5292 18 38961375 to 38961378 3 + TSS region transcription start site region 5292
Cpgi9981 18 38992579 to 38994338 1759 CpG island CpG island 9981
Tssr150814 18 38993093 to 38993107 14 + TSS region transcription start site region 150814
Tssr150815 18 38993126 to 38993186 60 + TSS region transcription start site region 150815
Tssr150816 18 38993193 to 38993205 12 + TSS region transcription start site region 150816
Tssr150817 18 38993256 to 38993263 7 + TSS region transcription start site region 150817
Tssr150818 18 38993273 to 38993286 13 + TSS region transcription start site region 150818
Gm15334 18 38993635 to 38994192 557 - antisense lncRNA gene predicted gene 15334
Gm41705 18 38996913 to 39012464 15551 + lncRNA gene predicted gene, 41705
D18Mit193 18 39016654 to 39016771 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 193
Tssr150819 18 39024142 to 39024181 39 + TSS region transcription start site region 150819
Tssr5293 18 39026683 to 39026686 3 + TSS region transcription start site region 5293
Tssr150820 18 39031543 to 39031544 1 + TSS region transcription start site region 150820
Tssr150821 18 39072539 to 39072542 3 + TSS region transcription start site region 150821