Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38807916-39467919

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap26 18 38617646 to 39376285 758639 + protein coding gene Rho GTPase activating protein 26
Fgf1 18 38838673 to 38929404 90731 - protein coding gene fibroblast growth factor 1
Tssr153055 18 38866702 to 38866748 46 - TSS region transcription start site region 153055
Tssr153056 18 38867007 to 38867016 9 - TSS region transcription start site region 153056
Tssr153057 18 38867058 to 38867074 16 - TSS region transcription start site region 153057
Tssr153058 18 38867081 to 38867092 11 - TSS region transcription start site region 153058
Tssr150813 18 38869580 to 38869590 10 + TSS region transcription start site region 150813
Tssr153059 18 38881427 to 38881455 28 - TSS region transcription start site region 153059
Tssr153060 18 38881512 to 38881519 7 - TSS region transcription start site region 153060
Gm5820 18 38892456 to 38981623 89167 + protein coding gene predicted gene 5820
Tssr153061 18 38918642 to 38918710 68 - TSS region transcription start site region 153061
Tssr153062 18 38929133 to 38929145 12 - TSS region transcription start site region 153062
Tssr153063 18 38929148 to 38929168 20 - TSS region transcription start site region 153063
Tssr153064 18 38929173 to 38929199 26 - TSS region transcription start site region 153064
Tssr153065 18 38929378 to 38929396 18 - TSS region transcription start site region 153065
Tssr153066 18 38929401 to 38929410 9 - TSS region transcription start site region 153066
Tssr153067 18 38929462 to 38929480 18 - TSS region transcription start site region 153067
Tssr5292 18 38961375 to 38961378 3 + TSS region transcription start site region 5292
Cpgi9981 18 38992579 to 38994338 1759 CpG island CpG island 9981
Tssr150814 18 38993093 to 38993107 14 + TSS region transcription start site region 150814
Tssr150815 18 38993126 to 38993186 60 + TSS region transcription start site region 150815
Tssr150816 18 38993193 to 38993205 12 + TSS region transcription start site region 150816
Tssr150817 18 38993256 to 38993263 7 + TSS region transcription start site region 150817
Tssr150818 18 38993273 to 38993286 13 + TSS region transcription start site region 150818
Gm15334 18 38993635 to 38994192 557 - antisense lncRNA gene predicted gene 15334
Gm41705 18 38996913 to 39012464 15551 + lncRNA gene predicted gene, 41705
D18Mit193 18 39016654 to 39016771 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 193
Tssr150819 18 39024142 to 39024181 39 + TSS region transcription start site region 150819
Tssr5293 18 39026683 to 39026686 3 + TSS region transcription start site region 5293
Tssr150820 18 39031543 to 39031544 1 + TSS region transcription start site region 150820
Tssr150821 18 39072539 to 39072542 3 + TSS region transcription start site region 150821
Tssr153068 18 39137916 to 39137919 3 - TSS region transcription start site region 153068
Tssr150822 18 39174870 to 39174916 46 + TSS region transcription start site region 150822
Tssr153069 18 39185104 to 39185111 7 - TSS region transcription start site region 153069
Tssr153070 18 39185153 to 39185158 5 - TSS region transcription start site region 153070
Gm30572 18 39234220 to 39236441 2221 - lncRNA gene predicted gene, 30572
Gm15336 18 39246247 to 39302690 56443 - antisense lncRNA gene predicted gene 15336
Tssr150823 18 39251831 to 39251836 5 + TSS region transcription start site region 150823
Tssr150824 18 39291432 to 39291440 8 + TSS region transcription start site region 150824
Tssr150825 18 39291446 to 39291451 5 + TSS region transcription start site region 150825
Tssr150826 18 39306725 to 39306736 11 + TSS region transcription start site region 150826
Gm15333 18 39341601 to 39341964 363 - pseudogene predicted gene 15333
Tssr150827 18 39353496 to 39353498 2 + TSS region transcription start site region 150827
Tssr150828 18 39353560 to 39353564 4 + TSS region transcription start site region 150828
Tssr150829 18 39353671 to 39353677 6 + TSS region transcription start site region 150829
Gm15337 18 39357817 to 39371084 13267 - antisense lncRNA gene predicted gene 15337
Tssr150830 18 39362561 to 39362597 36 + TSS region transcription start site region 150830
Tssr150831 18 39362920 to 39362936 16 + TSS region transcription start site region 150831
Tssr150832 18 39371970 to 39371976 6 + TSS region transcription start site region 150832
Tssr153071 18 39389420 to 39389431 11 - TSS region transcription start site region 153071
Cpgi9982 18 39391150 to 39391507 357 CpG island CpG island 9982
Nr3c1 18 39410545 to 39491301 80756 - protein coding gene nuclear receptor subfamily 3, group C, member 1
Tssr153072 18 39466084 to 39466096 12 - TSS region transcription start site region 153072