Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38544173-39314199

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9978 18 38574315 to 38574503 188 CpG island CpG island 9978
Gm19100 18 38582858 to 38583455 597 + pseudogene predicted gene, 19100
Tssr153043 18 38585007 to 38585008 1 - TSS region transcription start site region 153043
Spry4 18 38586268 to 38601268 15000 - protein coding gene sprouty RTK signaling antagonist 4
Gm27369 18 38594158 to 38594228 70 + unclassified non-coding RNA gene predicted gene, 27369
Gm27804 18 38594365 to 38594483 118 + unclassified non-coding RNA gene predicted gene, 27804
Tssr153044 18 38598973 to 38598976 3 - TSS region transcription start site region 153044
Cpgi9979 18 38600222 to 38601873 1651 CpG island CpG island 9979
Tssr153045 18 38601336 to 38601355 19 - TSS region transcription start site region 153045
Tssr150804 18 38601498 to 38601525 27 + TSS region transcription start site region 150804
Tssr150805 18 38601605 to 38601619 14 + TSS region transcription start site region 150805
Tssr150806 18 38602239 to 38602260 21 + TSS region transcription start site region 150806
Tssr153046 18 38603093 to 38603113 20 - TSS region transcription start site region 153046
Arhgap26 18 38617646 to 39376285 758639 + protein coding gene Rho GTPase activating protein 26
Cpgi9980 18 38631452 to 38632235 783 CpG island CpG island 9980
Tssr153047 18 38631537 to 38631548 11 - TSS region transcription start site region 153047
Tssr153048 18 38631560 to 38631580 20 - TSS region transcription start site region 153048
Tssr153049 18 38631610 to 38631619 9 - TSS region transcription start site region 153049
Tssr150807 18 38631667 to 38631716 49 + TSS region transcription start site region 150807
Tssr150808 18 38632444 to 38632462 18 + TSS region transcription start site region 150808
Tssr153050 18 38634542 to 38634554 12 - TSS region transcription start site region 153050
Tssr153051 18 38635827 to 38635848 21 - TSS region transcription start site region 153051
Tssr153052 18 38635905 to 38635916 11 - TSS region transcription start site region 153052
Tssr150809 18 38637181 to 38637189 8 + TSS region transcription start site region 150809
Tssr153053 18 38642581 to 38642583 2 - TSS region transcription start site region 153053
D18Mit14 18 38669671 to 38669772 101 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 14
Tssr153054 18 38671746 to 38671748 2 - TSS region transcription start site region 153054
Tssr150810 18 38714315 to 38714334 19 + TSS region transcription start site region 150810
Tssr150811 18 38714360 to 38714384 24 + TSS region transcription start site region 150811
Gm19774 18 38714400 to 38714513 113 + pseudogene predicted gene, 19774
Tssr150812 18 38714514 to 38714533 19 + TSS region transcription start site region 150812
Gm15335 18 38717528 to 38718128 600 - pseudogene predicted gene 15335
Gm46642 18 38769590 to 38781337 11747 + lncRNA gene predicted gene, 46642
Gm8302 18 38771496 to 38772347 851 - pseudogene predicted gene 8302
Gm38447 18 38787164 to 38789045 1881 + lncRNA gene predicted gene, 38447
Fgf1 18 38838673 to 38929404 90731 - protein coding gene fibroblast growth factor 1
Tssr153055 18 38866702 to 38866748 46 - TSS region transcription start site region 153055
Tssr153056 18 38867007 to 38867016 9 - TSS region transcription start site region 153056
Tssr153057 18 38867058 to 38867074 16 - TSS region transcription start site region 153057
Tssr153058 18 38867081 to 38867092 11 - TSS region transcription start site region 153058
Tssr150813 18 38869580 to 38869590 10 + TSS region transcription start site region 150813
Tssr153059 18 38881427 to 38881455 28 - TSS region transcription start site region 153059
Tssr153060 18 38881512 to 38881519 7 - TSS region transcription start site region 153060
Gm5820 18 38892456 to 38981623 89167 + protein coding gene predicted gene 5820
Tssr153061 18 38918642 to 38918710 68 - TSS region transcription start site region 153061
Tssr153062 18 38929133 to 38929145 12 - TSS region transcription start site region 153062
Tssr153063 18 38929148 to 38929168 20 - TSS region transcription start site region 153063
Tssr153064 18 38929173 to 38929199 26 - TSS region transcription start site region 153064
Tssr153065 18 38929378 to 38929396 18 - TSS region transcription start site region 153065
Tssr153066 18 38929401 to 38929410 9 - TSS region transcription start site region 153066
Tssr153067 18 38929462 to 38929480 18 - TSS region transcription start site region 153067
Tssr5292 18 38961375 to 38961378 3 + TSS region transcription start site region 5292
Cpgi9981 18 38992579 to 38994338 1759 CpG island CpG island 9981
Tssr150814 18 38993093 to 38993107 14 + TSS region transcription start site region 150814
Tssr150815 18 38993126 to 38993186 60 + TSS region transcription start site region 150815
Tssr150816 18 38993193 to 38993205 12 + TSS region transcription start site region 150816
Tssr150817 18 38993256 to 38993263 7 + TSS region transcription start site region 150817
Tssr150818 18 38993273 to 38993286 13 + TSS region transcription start site region 150818
Gm15334 18 38993635 to 38994192 557 - antisense lncRNA gene predicted gene 15334
Gm41705 18 38996913 to 39012464 15551 + lncRNA gene predicted gene, 41705
D18Mit193 18 39016654 to 39016771 117 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 193
Tssr150819 18 39024142 to 39024181 39 + TSS region transcription start site region 150819
Tssr5293 18 39026683 to 39026686 3 + TSS region transcription start site region 5293
Tssr150820 18 39031543 to 39031544 1 + TSS region transcription start site region 150820
Tssr150821 18 39072539 to 39072542 3 + TSS region transcription start site region 150821
Tssr153068 18 39137916 to 39137919 3 - TSS region transcription start site region 153068
Tssr150822 18 39174870 to 39174916 46 + TSS region transcription start site region 150822
Tssr153069 18 39185104 to 39185111 7 - TSS region transcription start site region 153069
Tssr153070 18 39185153 to 39185158 5 - TSS region transcription start site region 153070
Gm30572 18 39234220 to 39236441 2221 - lncRNA gene predicted gene, 30572
Gm15336 18 39246247 to 39302690 56443 - antisense lncRNA gene predicted gene 15336
Tssr150823 18 39251831 to 39251836 5 + TSS region transcription start site region 150823
Tssr150824 18 39291432 to 39291440 8 + TSS region transcription start site region 150824
Tssr150825 18 39291446 to 39291451 5 + TSS region transcription start site region 150825
Tssr150826 18 39306725 to 39306736 11 + TSS region transcription start site region 150826