Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38459158-38729228

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ndfip1 18 38418975 to 38464399 45424 + protein coding gene Nedd4 family interacting protein 1
D18Mit71 18 38459363 to 38459474 111 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 71
Tssr5291 18 38464593 to 38464607 14 + TSS region transcription start site region 5291
Gm41704 18 38482099 to 38488778 6679 + lncRNA gene predicted gene, 41704
Cpgi9977 18 38483368 to 38483822 454 CpG island CpG island 9977
D18Mit135 18 38524548 to 38524677 129 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 135
Tssr150803 18 38542878 to 38542906 28 + TSS region transcription start site region 150803
Cpgi9978 18 38574315 to 38574503 188 CpG island CpG island 9978
Gm19100 18 38582858 to 38583455 597 + pseudogene predicted gene, 19100
Tssr153043 18 38585007 to 38585008 1 - TSS region transcription start site region 153043
Spry4 18 38586268 to 38601268 15000 - protein coding gene sprouty RTK signaling antagonist 4
Gm27369 18 38594158 to 38594228 70 + unclassified non-coding RNA gene predicted gene, 27369
Gm27804 18 38594365 to 38594483 118 + unclassified non-coding RNA gene predicted gene, 27804
Tssr153044 18 38598973 to 38598976 3 - TSS region transcription start site region 153044
Cpgi9979 18 38600222 to 38601873 1651 CpG island CpG island 9979
Tssr153045 18 38601336 to 38601355 19 - TSS region transcription start site region 153045
Tssr150804 18 38601498 to 38601525 27 + TSS region transcription start site region 150804
Tssr150805 18 38601605 to 38601619 14 + TSS region transcription start site region 150805
Tssr150806 18 38602239 to 38602260 21 + TSS region transcription start site region 150806
Tssr153046 18 38603093 to 38603113 20 - TSS region transcription start site region 153046
Arhgap26 18 38617646 to 39376285 758639 + protein coding gene Rho GTPase activating protein 26
Cpgi9980 18 38631452 to 38632235 783 CpG island CpG island 9980
Tssr153047 18 38631537 to 38631548 11 - TSS region transcription start site region 153047
Tssr153048 18 38631560 to 38631580 20 - TSS region transcription start site region 153048
Tssr153049 18 38631610 to 38631619 9 - TSS region transcription start site region 153049
Tssr150807 18 38631667 to 38631716 49 + TSS region transcription start site region 150807
Tssr150808 18 38632444 to 38632462 18 + TSS region transcription start site region 150808
Tssr153050 18 38634542 to 38634554 12 - TSS region transcription start site region 153050
Tssr153051 18 38635827 to 38635848 21 - TSS region transcription start site region 153051
Tssr153052 18 38635905 to 38635916 11 - TSS region transcription start site region 153052
Tssr150809 18 38637181 to 38637189 8 + TSS region transcription start site region 150809
Tssr153053 18 38642581 to 38642583 2 - TSS region transcription start site region 153053
D18Mit14 18 38669671 to 38669772 101 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 14
Tssr153054 18 38671746 to 38671748 2 - TSS region transcription start site region 153054
Tssr150810 18 38714315 to 38714334 19 + TSS region transcription start site region 150810
Tssr150811 18 38714360 to 38714384 24 + TSS region transcription start site region 150811
Gm19774 18 38714400 to 38714513 113 + pseudogene predicted gene, 19774
Tssr150812 18 38714514 to 38714533 19 + TSS region transcription start site region 150812
Gm15335 18 38717528 to 38718128 600 - pseudogene predicted gene 15335