Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38457878-38627906

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ndfip1 18 38418975 to 38464399 45424 + protein coding gene Nedd4 family interacting protein 1
D18Mit71 18 38459363 to 38459474 111 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 71
Tssr5291 18 38464593 to 38464607 14 + TSS region transcription start site region 5291
Gm41704 18 38482099 to 38488778 6679 + lncRNA gene predicted gene, 41704
Cpgi9977 18 38483368 to 38483822 454 CpG island CpG island 9977
D18Mit135 18 38524548 to 38524677 129 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 135
Tssr150803 18 38542878 to 38542906 28 + TSS region transcription start site region 150803
Cpgi9978 18 38574315 to 38574503 188 CpG island CpG island 9978
Gm19100 18 38582858 to 38583455 597 + pseudogene predicted gene, 19100
Tssr153043 18 38585007 to 38585008 1 - TSS region transcription start site region 153043
Spry4 18 38586268 to 38601268 15000 - protein coding gene sprouty RTK signaling antagonist 4
Gm27369 18 38594158 to 38594228 70 + unclassified non-coding RNA gene predicted gene, 27369
Gm27804 18 38594365 to 38594483 118 + unclassified non-coding RNA gene predicted gene, 27804
Tssr153044 18 38598973 to 38598976 3 - TSS region transcription start site region 153044
Cpgi9979 18 38600222 to 38601873 1651 CpG island CpG island 9979
Tssr153045 18 38601336 to 38601355 19 - TSS region transcription start site region 153045
Tssr150804 18 38601498 to 38601525 27 + TSS region transcription start site region 150804
Tssr150805 18 38601605 to 38601619 14 + TSS region transcription start site region 150805
Tssr150806 18 38602239 to 38602260 21 + TSS region transcription start site region 150806
Tssr153046 18 38603093 to 38603113 20 - TSS region transcription start site region 153046
Arhgap26 18 38617646 to 39376285 758639 + protein coding gene Rho GTPase activating protein 26