Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38312768-38602772

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf14 18 38296635 to 38317847 21212 + protein coding gene ring finger protein 14
Gnpda1 18 38327558 to 38339003 11445 - protein coding gene glucosamine-6-phosphate deaminase 1
Gm41702 18 38338229 to 38339710 1481 + lncRNA gene predicted gene, 41702
Cpgi9974 18 38338312 to 38339216 904 CpG island CpG island 9974
Tssr153034 18 38338934 to 38338985 51 - TSS region transcription start site region 153034
Tssr153035 18 38338991 to 38338994 3 - TSS region transcription start site region 153035
Tssr153036 18 38338997 to 38339007 10 - TSS region transcription start site region 153036
Tssr150793 18 38339071 to 38339101 30 + TSS region transcription start site region 150793
Tssr153037 18 38349939 to 38349946 7 - TSS region transcription start site region 153037
Tssr153038 18 38350100 to 38350133 33 - TSS region transcription start site region 153038
Gm24690 18 38356578 to 38356674 96 + rRNA gene predicted gene, 24690
Gm4949 18 38359444 to 38360538 1094 - pseudogene predicted gene 4949
Gm41703 18 38361361 to 38367990 6629 - lncRNA gene predicted gene, 41703
Cpgi9975 18 38367326 to 38367521 195 CpG island CpG island 9975
Tssr153039 18 38375547 to 38375557 10 - TSS region transcription start site region 153039
Tssr150794 18 38379339 to 38379350 11 + TSS region transcription start site region 150794
Tssr153040 18 38381173 to 38381176 3 - TSS region transcription start site region 153040
Tssr153041 18 38381181 to 38381191 10 - TSS region transcription start site region 153041
Tssr150795 18 38406457 to 38406467 10 + TSS region transcription start site region 150795
Cpgi9976 18 38418585 to 38419687 1102 CpG island CpG island 9976
Tssr150796 18 38418909 to 38418916 7 + TSS region transcription start site region 150796
Tssr150797 18 38418927 to 38418938 11 + TSS region transcription start site region 150797
Tssr150798 18 38418946 to 38418985 39 + TSS region transcription start site region 150798
Ndfip1 18 38418975 to 38464399 45424 + protein coding gene Nedd4 family interacting protein 1
Tssr150799 18 38419066 to 38419093 27 + TSS region transcription start site region 150799
Tssr153042 18 38419354 to 38419365 11 - TSS region transcription start site region 153042
Tssr150800 18 38419490 to 38419495 5 + TSS region transcription start site region 150800
Tssr150801 18 38428761 to 38428762 1 + TSS region transcription start site region 150801
Tssr150802 18 38457768 to 38457772 4 + TSS region transcription start site region 150802
D18Mit71 18 38459363 to 38459474 111 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 71
Tssr5291 18 38464593 to 38464607 14 + TSS region transcription start site region 5291
Gm41704 18 38482099 to 38488778 6679 + lncRNA gene predicted gene, 41704
Cpgi9977 18 38483368 to 38483822 454 CpG island CpG island 9977
D18Mit135 18 38524548 to 38524677 129 DNA segment DNA segment, Chr 18, Massachusetts Institute of Technology 135
Tssr150803 18 38542878 to 38542906 28 + TSS region transcription start site region 150803
Cpgi9978 18 38574315 to 38574503 188 CpG island CpG island 9978
Gm19100 18 38582858 to 38583455 597 + pseudogene predicted gene, 19100
Tssr153043 18 38585007 to 38585008 1 - TSS region transcription start site region 153043
Spry4 18 38586268 to 38601268 15000 - protein coding gene sprouty RTK signaling antagonist 4
Gm27369 18 38594158 to 38594228 70 + unclassified non-coding RNA gene predicted gene, 27369
Gm27804 18 38594365 to 38594483 118 + unclassified non-coding RNA gene predicted gene, 27804
Tssr153044 18 38598973 to 38598976 3 - TSS region transcription start site region 153044
Cpgi9979 18 38600222 to 38601873 1651 CpG island CpG island 9979
Tssr153045 18 38601336 to 38601355 19 - TSS region transcription start site region 153045
Tssr150804 18 38601498 to 38601525 27 + TSS region transcription start site region 150804
Tssr150805 18 38601605 to 38601619 14 + TSS region transcription start site region 150805
Tssr150806 18 38602239 to 38602260 21 + TSS region transcription start site region 150806