Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 18:38208548-38248561

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13 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcdh1 18 38189454 to 38212048 22594 - protein coding gene protocadherin 1
Cpgi9969 18 38209604 to 38213013 3409 CpG island CpG island 9969
Tssr153021 18 38209642 to 38209670 28 - TSS region transcription start site region 153021
Tssr153022 18 38209676 to 38209728 52 - TSS region transcription start site region 153022
Tssr153023 18 38209733 to 38209747 14 - TSS region transcription start site region 153023
Tssr153024 18 38209767 to 38209786 19 - TSS region transcription start site region 153024
Tssr153025 18 38211957 to 38211995 38 - TSS region transcription start site region 153025
2010320O07Rik 18 38212112 to 38229163 17051 + lncRNA gene RIKEN cDNA 2010320O07 gene
Tssr150777 18 38228548 to 38228561 13 + TSS region transcription start site region 150777
1700086O06Rik 18 38238405 to 38250565 12160 - lincRNA gene RIKEN cDNA 1700086O06 gene
Cpgi9970 18 38239125 to 38239975 850 CpG island CpG island 9970
Tssr150778 18 38244789 to 38244798 9 + TSS region transcription start site region 150778
Gm10268 18 38244828 to 38245382 554 + pseudogene predicted gene 10268